RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PLK2Q9NYY3 685 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 IL37Q9NZH6 218 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 SLC27A6Q9Y2P4 619 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 TMEM131Q92545 1883 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 FAM92AA1XBS5 289 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ENC1O14682 589 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ARHGAP6O43182 974 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 PAPSS1O43252 624 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 DFNA5O60443 496 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 RFPL3O75679 317 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ACO1P21399 889 aaKnown RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 LONP1P36776 959 aaKnown RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 COPAP53621 1224 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 CXADRP78310 365 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 TARDBPQ13148 414 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 LAYNQ6UX15 382 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ADAT2Q7Z6V5 191 aaKnown RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 WDR49Q8IV35 697 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 FGF11Q92914 225 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 C6orf106Q9H6K1 298 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 DNMT3LQ9UJW3 386 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 FBXO10Q9UK96 956 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-224ENST00000481929 MGAQ8IWI9 3026 aa15.78■□□□□ 0.12
HDAC6-224ENST00000481929 ZNF233A6NK53 670 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 TBX18O95935 607 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 C1SP09871 688 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 ATP5C1P36542 298 aaKnown RBP15.77■□□□□ 0.12
HDAC6-224ENST00000481929 CTSKP43235 329 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 MFAP3P55082 362 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 TLE3Q04726 772 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 ALCAMQ13740 583 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 GEN1Q17RS7 908 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 HES3Q5TGS1 186 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 TLR8Q9NR97 1041 aaKnown RBP15.77■□□□□ 0.12
HDAC6-224ENST00000481929 KIF3AQ9Y496 699 aa15.77■□□□□ 0.12
HDAC6-224ENST00000481929 NUMA1Q14980 2115 aa15.77■□□□□ 0.11
HDAC6-224ENST00000481929 COL5A1P20908 1838 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-224ENST00000481929 LDOC1O95751 146 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-224ENST00000481929 EPHX1P07099 455 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 ACSL1P33121 698 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 ACTN2P35609 894 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 CASP5P51878 434 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 CCDC173Q0VFZ6 552 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 ZNF234Q14588 700 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 CNDP2Q96KP4 475 aaKnown RBP15.76■□□□□ 0.11
HDAC6-224ENST00000481929 LHX5Q9H2C1 402 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 FBXO44Q9H4M3 255 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
HDAC6-224ENST00000481929 CKAP5Q14008 2032 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 A0A1B0GTQ1 180 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 AP1G2O75843 785 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 CST3P01034 146 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-224ENST00000481929 PENKP01210 267 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-224ENST00000481929 PRKCHP24723 683 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 CD27P26842 260 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 PGFP49763 221 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 C21orf59P57076 290 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 KCNC4Q03721 635 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 GRIN1Q05586 938 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 DNAJC3Q13217 504 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 EIF4HQ15056 248 aaKnown RBP15.75■□□□□ 0.11
HDAC6-224ENST00000481929 SERPINA13PQ6UXR4 307 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 Q6ZNB5 142 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 USP49Q70CQ1 688 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 CBWD2Q8IUF1 395 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 SPACA3Q8IXA5 215 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 OR2T3Q8NH03 318 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 BIRC7Q96CA5 298 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 WBP1Q96G27 269 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 ARID3AQ99856 593 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 CYLDQ9NQC7 956 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 KRT82Q9NSB4 513 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 ELOVL2Q9NXB9 296 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 STK17AQ9UEE5 414 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 MYH10P35580 1976 aa15.75■□□□□ 0.11
HDAC6-224ENST00000481929 CBX4O00257 560 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 BRINP1O60477 761 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 FSBPO95073 299 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 SEMA4FO95754 770 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 ACADVLP49748 655 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 BCAT1P54687 386 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 RHDQ02161 417 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 KCNT1Q5JUK3 1230 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 FBXL19Q6PCT2 694 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 PAQR9Q6ZVX9 377 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 GATAD2AQ86YP4 633 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 DNAJC19Q96DA6 116 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 ACE2Q9BYF1 805 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-224ENST00000481929 CIPCQ9C0C6 399 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 BTBD1Q9H0C5 482 aa15.74■□□□□ 0.11
HDAC6-224ENST00000481929 NXF1Q9UBU9 619 aaKnown RBP15.74■□□□□ 0.11
HDAC6-224ENST00000481929 ATMQ13315 3056 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms