RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 HLA-CQ95604 372 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 TCEAL4Q96EI5 215 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 SLX1AQ9BQ83 275 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 NUP85Q9BW27 656 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 CLIC5Q9NZA1 410 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 CTTNBP2NLQ9P2B4 639 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 MRPS23Q9Y3D9 190 aaKnown RBP12.1□□□□□ -0.47
HPS4-212ENST00000481910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
HPS4-212ENST00000481910 ANAPC1Q9H1A4 1944 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 KIF5CO60282 957 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 FYNP06241 537 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RARGP13631 454 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RFC1P35251 1148 aaPredicted RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 HNRNPH2P55795 449 aaKnown RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 CYP4F8P98187 520 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 KIF5AQ12840 1032 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TMED1Q13445 227 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 DCAF6Q58WW2 860 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 HECTD3Q5T447 861 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 SYPL2Q5VXT5 272 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TXNDC8Q6A555 127 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RSRC2Q7L4I2 434 aaKnown RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 DEFB106AQ8N104 65 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 EMC1Q8N766 993 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 JOSD2Q8TAC2 188 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 SLC35G2Q8TBE7 412 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RNF139Q8WU17 664 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 CCSER2Q9H7U1 834 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
HPS4-212ENST00000481910 OBSL1O75147 1896 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 C2orf78A6NCI8 922 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TLR5O60602 858 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 FSHRP23945 695 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 MATKP42679 507 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 MTHFRP42898 656 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TEAD2Q15562 447 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 ARHGAP15Q53QZ3 475 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 PRSS36Q5K4E3 855 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 C10orf120Q5SQS8 335 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 ARCQ7LC44 396 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RHOT2Q8IXI1 618 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 MAB21L3Q8N8X9 362 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 ING5Q8WYH8 240 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 RFFLQ8WZ73 363 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 SLC2A13Q96QE2 648 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 NACA2Q9H009 215 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 SLITRK6Q9H5Y7 841 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 TRPC7Q9HCX4 862 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
HPS4-212ENST00000481910 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 UVRAGQ9P2Y5 699 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 PPP2R2CQ9Y2T4 447 aa12.09□□□□□ -0.47
HPS4-212ENST00000481910 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
HPS4-212ENST00000481910 CLUHO75153 1309 aa12.08□□□□□ -0.47
HPS4-212ENST00000481910 A0A0U1RQJ8 604 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 TMEM191CA6NGB0 347 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 NRG2O14511 850 aaPredicted RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 SH3BP5O60239 455 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 MOSPD3O75425 235 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 DAB1O75553 588 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 TBX18O95935 607 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 NOS2P35228 1153 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 ATP5C1P36542 298 aaKnown RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 TUBP50607 506 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 CBX2Q14781 532 aaPredicted RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 STXBP5Q5T5C0 1151 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 GPR158Q5T848 1215 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 BEND5Q7L4P6 421 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 TADA2BQ86TJ2 420 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 PARP9Q8IXQ6 854 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 ZNF564Q8TBZ8 553 aaPredicted RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 RXFP2Q8WXD0 754 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 CYP2S1Q96SQ9 504 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 CDK5RAP1Q96SZ6 601 aaKnown RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 OSGEPQ9NPF4 335 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 OLA1Q9NTK5 396 aaKnown RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 TPX2Q9ULW0 747 aaKnown RBP12.08□□□□□ -0.48
HPS4-212ENST00000481910 STAP1Q9ULZ2 295 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 COG5Q9UP83 839 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms