RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 IRF1P10914 325 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 TCF3P15923 654 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 YWHAQP27348 245 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 MPLP40238 635 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 SNRPFP62306 86 aaKnown RBP9.54□□□□□ -0.88
HLA-B-253ENST00000481849 NOP14P78316 857 aaKnown RBP9.54□□□□□ -0.88
HLA-B-253ENST00000481849 DLG4P78352 724 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 SLC7A9P82251 487 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 SHC2P98077 582 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 CTBSQ01459 385 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 CREB5Q02930 508 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 STK4Q13043 487 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 NCOA4Q13772 614 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 DHCR24Q15392 516 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 GAB4Q2WGN9 574 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 PLK5Q496M5 336 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 ZNF667Q5HYK9 610 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 ANO7Q6IWH7 933 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 FAM35AQ86V20 835 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 NUP93Q8N1F7 819 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 SCAMP5Q8TAC9 235 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 USP33Q8TEY7 942 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 JAKMIP2Q96AA8 810 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 PAGE5Q96GU1 130 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 SDCBP2Q9H190 292 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 DUSP15Q9H1R2 295 aaPredicted RBP9.54□□□□□ -0.88
HLA-B-253ENST00000481849 ZDHHC4Q9NPG8 344 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 EXOC1Q9NV70 894 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 RELNP78509 3460 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 FANCMQ8IYD8 2048 aa9.54□□□□□ -0.88
HLA-B-253ENST00000481849 NUP210Q8TEM1 1887 aaPredicted RBP9.53□□□□□ -0.88
HLA-B-253ENST00000481849 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CCDC163A0A0D9SF12 145 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 A0A1B0GVL5 298 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 COCHO43405 550 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 KLRC4O43908 158 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 VNN1O95497 513 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 OLFM2O95897 454 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ZNF806P0C7X5 589 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CCDC130P13994 396 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ATICP31939 592 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 PPP3CCP48454 512 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 MESP2Q0VG99 397 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ELF2Q15723 593 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CEP135Q66GS9 1140 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 SPOPLQ6IQ16 392 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ACOT1Q86TX2 421 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 C12orf40Q86WS4 652 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 C12orf56Q8IXR9 622 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ADGRG2Q8IZP9 1017 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ALLCQ8N6M5 410 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 NAT16Q8N8M0 369 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 TXNDC5Q8NBS9 432 aaKnown RBP9.53□□□□□ -0.88
HLA-B-253ENST00000481849 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 KIAA0895Q8NCT3 520 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 C1orf216Q8TAB5 229 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 GOLGA5Q8TBA6 731 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 LOXL4Q96JB6 756 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CEP295NLQ96MC4 621 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 NACA2Q9H009 215 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 KRT82Q9NSB4 513 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 FAM49BQ9NUQ9 324 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 GMIPQ9P107 970 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CGNQ9P2M7 1197 aaKnown RBP9.53□□□□□ -0.88
HLA-B-253ENST00000481849 HMGXB4Q9UGU5 601 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 SH3BP1Q9Y3L3 701 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 ATP8B3O60423 1300 aa9.53□□□□□ -0.88
HLA-B-253ENST00000481849 COL12A1Q99715 3063 aa9.52□□□□□ -0.88
HLA-B-253ENST00000481849 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 FOXD2O60548 495 aaPredicted RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 AKAP3O75969 853 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 RHOBTB1O94844 696 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 RTN3O95197 1032 aaPredicted RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 KAT7O95251 611 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 KLF8O95600 359 aaPredicted RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 C4BPAP04003 597 aaKnown RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 NR3C1P04150 777 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 FAM163BP0C2L3 166 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 SLFN14P0C7P3 912 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 ADH5P11766 374 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 HNRNPLP14866 589 aaKnown RBP eCLIP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 PFKFB1P16118 471 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 PFKLP17858 780 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 BCKDHBP21953 392 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 ADORA2BP29275 332 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 PMLP29590 882 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 SLC5A3P53794 718 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 MAP3K7CLP57077 242 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 USP39Q53GS9 565 aaKnown RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
HLA-B-253ENST00000481849 LY6G5CQ5SRR4 150 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 STPG1Q5TH74 334 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 RHBDF2Q6PJF5 856 aa9.52□□□□□ -0.89
HLA-B-253ENST00000481849 PAQR9Q6ZVX9 377 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms