RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SIGLEC16A6NMB1 481 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 YJEFN3A6XGL0 299 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CHURC1-FNTBB4DL54 471 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 E5RJQ4 531 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 E7ENQ6 273 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 LEFTY2O00292 366 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CACNG3O60359 315 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MFAP3LO75121 409 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 RTN2O75298 545 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 STC2O76061 302 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MTA2O94776 668 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CSPG5O95196 566 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ADH1CP00326 375 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 FYNP06241 537 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MBL2P11226 248 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 DESP17661 470 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CHRNB2P17787 502 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 AOC1P19801 751 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 DRD1P21728 446 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 GBP1P32455 592 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 HARS2P49590 506 aaKnown RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CYP4F8P98187 520 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 KLHL30Q0D2K2 578 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SCAPQ12770 1279 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SLC12A1Q13621 1099 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 RUNX3Q13761 415 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CCINQ13939 588 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 EIF4HQ15056 248 aaKnown RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MLF2Q15773 248 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SLC18A3Q16572 532 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ASTE1Q2TB18 679 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 EML3Q32P44 896 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF528Q3MIS6 628 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SLC25A52Q3SY17 297 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 HSP90AA4PQ58FG1 418 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 PPP1R15BQ5SWA1 713 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ADGRF1Q5T601 910 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 PLEKHA7Q6IQ23 1121 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ACAD10Q6JQN1 1059 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 DENND1BQ6P3S1 775 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF852Q6ZMS4 543 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ERICH1Q86X53 443 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 XYLT1Q86Y38 959 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CREBRFQ8IUR6 639 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ETFBKMTQ8IXQ9 262 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CCDC170Q8IYT3 715 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ADGRG2Q8IZP9 1017 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 FBXL6Q8N531 539 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 NIPA2Q8N8Q9 360 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ARL14EPQ8N8R7 260 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SH3RF2Q8TEC5 729 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 RNF139Q8WU17 664 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 KHSRPQ92945 711 aaKnown RBP eCLIP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 NTAN1Q96AB6 310 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 BTN2A3PQ96KV6 586 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 FAM126AQ9BYI3 521 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 BRD9Q9H8M2 597 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 NMUR1Q9HB89 426 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 NLRC4Q9NPP4 1024 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 ABHD10Q9NUJ1 306 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 PARVAQ9NVD7 372 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 OSER1Q9NX31 292 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 DONSONQ9NYP3 566 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MAGED2Q9UNF1 606 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 STARD13Q9Y3M8 1113 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 CPQQ9Y646 472 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 SCINQ9Y6U3 715 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 MUC22E2RYF6 1773 aaPredicted RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 IGLV3-10A0A075B6K4 115 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SHISA7A6NL88 538 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 C2CD4BA6NLJ0 364 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 KCNU1A8MYU2 1149 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF487B1APH4 448 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TULP2O00295 520 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 NRG2O14511 850 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TIMM44O43615 452 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ATG13O75143 517 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TRUB2O95900 331 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 MMEP08473 750 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CCR1P32246 355 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CTHP32929 405 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 MAN1A1P33908 653 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PCK1P35558 622 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 USP8P40818 1118 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 IFNAR2P48551 515 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SLC11A2P49281 568 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CXCR3P49682 368 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 KLK7P49862 253 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF143P52747 638 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 GPC5P78333 572 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ZXDBP98169 803 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 APBA1Q02410 837 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 GAD2Q05329 585 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ORC1Q13415 861 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ENPP2Q13822 863 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms