RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 TNFRSF10BO14763 440 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 MDM4O15151 490 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 KRT10P13645 584 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 OR1D2P34982 312 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RDXP35241 583 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CDKN2BP42772 138 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ATXN1P54253 815 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 YWHAGP61981 247 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 VSNL1P62760 191 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RPL10AP62906 217 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HTRA4P83105 476 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DR1Q01658 176 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DSG1Q02413 1049 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 NME3Q13232 169 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CYP1B1Q16678 543 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DDR2Q16832 855 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 BOLA3Q53S33 107 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SYPL2Q5VXT5 272 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 BTBD8Q5XKL5 378 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 PM20D1Q6GTS8 502 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CYP4V2Q6ZWL3 525 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 MAATS1Q7Z4T9 603 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DDX53Q86TM3 631 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FAM131BQ86XD5 332 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RFX6Q8HWS3 928 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FAM160A2Q8N612 972 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 PRELID2Q8N945 189 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 C12orf50Q8NA57 414 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 EDEM1Q92611 657 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CENPIQ92674 756 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 USB1Q9BQ65 265 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FBXO44Q9H4M3 255 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 GPATCH2LQ9NWQ4 482 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 AMACRQ9UHK6 382 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RASAL2Q9UJF2 1139 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 AP4E1Q9UPM8 1137 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 C3orf70A6NLC5 250 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 TTI1O43156 1089 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ADAM12O43184 909 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ERLIN1O75477 346 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SOAT2O75908 522 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RTN3O95197 1032 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 VNN2O95498 520 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 S1PR4O95977 384 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FYNP06241 537 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 H2AFXP16104 143 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ATP2A2P16615 1042 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FNTAP49354 379 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DYNLT1P63172 113 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 PITX1P78337 314 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 GUCY2DQ02846 1103 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 KRT17Q04695 432 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DUSP4Q13115 394 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 KLF1Q13351 362 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SNX1Q13596 522 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DHX34Q14147 1143 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DPYSL3Q14195 570 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 BRD3Q15059 726 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 PDK2Q15119 407 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 QPCTQ16769 361 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ZC3H12AQ5D1E8 599 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ERMARDQ5T6L9 678 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 OTUD1Q5VV17 481 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 BSPRYQ5W0U4 402 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SLC8B1Q6J4K2 584 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 WDR93Q6P2C0 686 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DENND5BQ6ZUT9 1274 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SND1Q7KZF4 910 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 MAP7D3Q8IWC1 876 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC105Q8IYK2 499 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ZDHHC14Q8IZN3 488 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 VPS52Q8N1B4 723 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC185Q8N715 623 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HDAC7Q8WUI4 952 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 C1orf54Q8WWF1 131 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 ATG4AQ8WYN0 398 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 FBXO32Q969P5 355 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC114Q96M63 670 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DCLK3Q9C098 648 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 HOMER3Q9NSC5 361 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DDIT4Q9NX09 232 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 DMGDHQ9UI17 866 aaKnown RBP10.86□□□□□ -0.67
LINC00173-203ENST00000480237 RAB21Q9UL25 225 aa10.86□□□□□ -0.67
LINC00173-203ENST00000480237 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
LINC00173-203ENST00000480237 A0A1W2PQH9 124 aa10.85□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC151A5D8V7 595 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms