RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 NDUFAF4Q9P032 175 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 FBXO2Q9UK22 296 aaPredicted RBP4.1□□□□□ -1.75
NF1-209ENST00000479536 SLC27A6Q9Y2P4 619 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 FPGT-TNNI3KV9GXZ4 949 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 COL15A1P39059 1388 aa4.1□□□□□ -1.75
NF1-209ENST00000479536 CCDC196A0A1B0GTZ2 297 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 AHRRA9YTQ3 701 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 KIF28PB7ZC32 967 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 TRIM24O15164 1050 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 CBFA2T3O75081 653 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RNASEH2AO75792 299 aaKnown RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 RECQL4O94761 1208 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 BAIAP3O94812 1187 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 CER1O95813 267 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 MTHFSP49914 203 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 CDK7P50613 346 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 SP2Q02086 613 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 CYP2A13Q16696 494 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 GEN1Q17RS7 908 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 GALNTL6Q49A17 601 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RABL3Q5HYI8 236 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 MZT2BQ6NZ67 158 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 MSANTD2Q6P1R3 559 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 KCNV1Q6PIU1 500 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RINLQ6ZS11 566 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 BBS12Q6ZW61 710 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RHOUQ7L0Q8 258 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 SYT13Q7L8C5 426 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 TRABD2AQ86V40 505 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 IZUMO1Q8IYV9 350 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 HMGB4Q8WW32 186 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 NACC2Q96BF6 587 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 FAM136AQ96C01 138 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 HVCN1Q96D96 273 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RNF31Q96EP0 1072 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RRP36Q96EU6 259 aaKnown RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 HAPLN3Q96S86 360 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 C17orf80Q9BSJ5 609 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 GPR63Q9BZJ6 419 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 AMBRA1Q9C0C7 1298 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 OSBPL5Q9H0X9 879 aaPredicted RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 NOD2Q9HC29 1040 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 ALG13Q9NP73 1137 aaKnown RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 PI4KBQ9UBF8 816 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 KCND3Q9UK17 655 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RIMKLBQ9ULI2 386 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 NFU1Q9UMS0 254 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 SORCS3Q9UPU3 1222 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 DERAQ9Y315 318 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 RRP7AQ9Y3A4 280 aaKnown RBP4.09□□□□□ -1.75
NF1-209ENST00000479536 XDHP47989 1333 aa4.09□□□□□ -1.75
NF1-209ENST00000479536 GRID2IPA4D2P6 1211 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 FAM90A20PA6NIJ5 464 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 KIAA0355O15063 1070 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 LARGE1O95461 756 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 TBX18O95935 607 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 TFRCP02786 760 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 HSP90AA1P07900 732 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 CNPP09543 421 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 GATA3P23771 443 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 POLR2AP24928 1970 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 MCM2P49736 904 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 RBM5P52756 815 aaKnown RBP eCLIP4.08□□□□□ -1.76
NF1-209ENST00000479536 TIRAPP58753 221 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 SF3A3Q12874 501 aaKnown RBP eCLIP4.08□□□□□ -1.76
NF1-209ENST00000479536 CLCA4Q14CN2 919 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 ACOX1Q15067 660 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 LY6KQ17RY6 165 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 P3H1Q32P28 736 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 SPDYE7PQ495Y7 208 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 TMEM196Q5HYL7 178 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 ZNF362Q5T0B9 420 aaPredicted RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 L1TD1Q5T7N2 865 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 HECTD2Q5U5R9 776 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 SLC9A4Q6AI14 798 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 SP5Q6BEB4 398 aaPredicted RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 OLFML1Q6UWY5 402 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 METTL25Q8N6Q8 603 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 TSPYL6Q8N831 410 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 MCRS1Q96EZ8 462 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 BOD1Q96IK1 185 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 MECRQ9BV79 373 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 TPSD1Q9BZJ3 242 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 BLOC1S4Q9NUP1 217 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 IRAK4Q9NWZ3 460 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 DRG1Q9Y295 367 aaKnown RBP4.08□□□□□ -1.76
NF1-209ENST00000479536 MAP3K2Q9Y2U5 619 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 NOX1Q9Y5S8 564 aa4.08□□□□□ -1.76
NF1-209ENST00000479536 MARCH11A6NNE9 402 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 STX16-NPEPL1H3BU86 382 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 EXOC5O00471 708 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 STX16O14662 325 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 PPM1DO15297 605 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 WDR47O94967 919 aa4.07□□□□□ -1.76
NF1-209ENST00000479536 HNRNPA1P09651 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms