RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 SIRPGQ9P1W8 387 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 HBS1LQ9Y450 684 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 ARHGAP42A6NI28 874 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 LYPLA1O75608 230 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 CNMDO75829 334 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 PEX2P28328 305 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 PEX6Q13608 980 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 ATF7IP2Q5U623 682 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 IER5Q5VY09 327 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 MARK2Q7KZI7 788 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 RIOX2Q8IUF8 465 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 NUDCD3Q8IVD9 361 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 WWP1Q9H0M0 922 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 CXCL16Q9H2A7 254 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 S100A14Q9HCY8 104 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 RGPD3A6NKT7 1758 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 RGPD4Q7Z3J3 1758 aa13.79□□□□□ -0.2
PDZRN3-208ENST00000479530 HMX2A2RU54 273 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 OPHN1O60890 802 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 EPHB1P54762 984 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 DYNC1I2Q13409 638 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 KCNJ11Q14654 390 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 C6orf163Q5TEZ5 329 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 FAM160B1Q5W0V3 765 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ZNF778Q96MU6 729 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ELOVL4Q9GZR5 314 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ELP3Q9H9T3 547 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 NDC80O14777 642 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 CSH1P0DML2 217 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 CSH2P0DML3 217 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ABCD1P33897 745 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 ASPHQ12797 758 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 DNAL1Q4LDG9 190 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 KCTD6Q8NC69 237 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 SLC26A7Q8TE54 656 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 SPATA33Q96N06 139 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 APOL6Q9BWW8 343 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 CDT1Q9H211 546 aa13.78□□□□□ -0.2
PDZRN3-208ENST00000479530 SDR42E2A6NKP2 422 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 LACTBL1A8MY62 500 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 ITM2AO43736 263 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 GRAP2O75791 330 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 LSM8O95777 96 aaKnown RBP13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 PROZP22891 400 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 EFNA5P52803 228 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 CCNIQ14094 377 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 TAZQ16635 292 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 MROH9Q5TGP6 573 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 WDR78Q5VTH9 848 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 TRNP1Q6NT89 227 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 TRMT10BQ6PF06 316 aaKnown RBP13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 ACAD11Q709F0 780 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 FAF2Q96CS3 445 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 RAB6BQ9NRW1 208 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 ETNK2Q9NVF9 386 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.2
PDZRN3-208ENST00000479530 IGKV6-21A0A0C4DH24 114 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 NOP56O00567 594 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 SNNO75324 88 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 APOC2P02655 101 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 LSAMPQ13449 338 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 TUBB3Q13509 450 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 HNRNPDQ14103 355 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 NOL9Q5SY16 702 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CELF3Q5SZQ8 465 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 DARS2Q6PI48 645 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 XYLT1Q86Y38 959 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 PPP1R13LQ8WUF5 828 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms