RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 P4HA1P13674 534 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 HLA-EP13747 358 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 CYP2J2P51589 502 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 MFAP3P55082 362 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 MAP3K7CLP57077 242 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 ORC1Q13415 861 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 BIRC3Q13489 604 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 CACUL1Q86Y37 369 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 ZMIZ2Q8NF64 920 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 PIP4K2CQ8TBX8 421 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 CRELD1Q96HD1 420 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 CLIC6Q96NY7 704 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 SMOQ99835 787 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 DNMT3LQ9UJW3 386 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 SCML2Q9UQR0 700 aa16.95■□□□□ 0.3
DDX56-210ENST00000479440 GCN1Q92616 2671 aaKnown RBP16.94■□□□□ 0.3
DDX56-210ENST00000479440 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
DDX56-210ENST00000479440 FAM149AA5PLN7 773 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 CYP26A1O43174 497 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
DDX56-210ENST00000479440 FAM200BP0CF97 657 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 CCDC130P13994 396 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 ACO1P21399 889 aaKnown RBP16.94■□□□□ 0.3
DDX56-210ENST00000479440 CHKAP35790 457 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 GRIA4P48058 902 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 PGFP49763 221 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 COPAP53621 1224 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
DDX56-210ENST00000479440 GEN1Q17RS7 908 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 MARCH9Q86YJ5 346 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 SLC2A14Q8TDB8 520 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 SLC39A7Q92504 469 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 OSGEPQ9NPF4 335 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
DDX56-210ENST00000479440 ATXN7O15265 892 aaPredicted RBP16.93■□□□□ 0.3
DDX56-210ENST00000479440 BEST1O76090 585 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 CYBBP04839 570 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 RARGP13631 454 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 HNF1BP35680 557 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 CSNK1EP49674 416 aaKnown RBP16.93■□□□□ 0.3
DDX56-210ENST00000479440 AP3M2P53677 418 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 ARID5AQ03989 594 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 ZNF234Q14588 700 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 PTPRNQ16849 979 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 KIF19Q2TAC6 998 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 CCDC157Q569K6 752 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 C10orf120Q5SQS8 335 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 FYB2Q5VWT5 728 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 LRRC69Q6ZNQ3 347 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 TMPRSS12Q86WS5 348 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 C1orf216Q8TAB5 229 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 HPS3Q969F9 1004 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
DDX56-210ENST00000479440 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 OSER1Q9NX31 292 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 FTSJ1Q9UET6 329 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 SNX11Q9Y5W9 270 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 CELSR3Q9NYQ7 3312 aa16.93■□□□□ 0.3
DDX56-210ENST00000479440 APC2O95996 2303 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 A0A087X0B3 334 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 MDM4O15151 490 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 PCDHGA12O60330 932 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 STC2O76061 302 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 PRB1P04280 392 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 EPHX1P07099 455 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 HOXD13P35453 343 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 PSEN1P49768 467 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 ASIC1P78348 528 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 NCOA4Q13772 614 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 C6orf118Q5T5N4 469 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 DHRS13Q6UX07 377 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 SERPINA13PQ6UXR4 307 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 FAM124AQ86V42 546 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 OR2T3Q8NH03 318 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 ZNF507Q8TCN5 953 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 ZNF516Q92618 1163 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 JAKMIP2Q96AA8 810 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 CIPCQ9C0C6 399 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX56-210ENST00000479440 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
DDX56-210ENST00000479440 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.92■□□□□ 0.3
DDX56-210ENST00000479440 ACACAQ13085 2346 aa16.92■□□□□ 0.3
DDX56-210ENST00000479440 A0A1W2PQH9 124 aa16.91■□□□□ 0.3
DDX56-210ENST00000479440 PLK4O00444 970 aa16.91■□□□□ 0.3
DDX56-210ENST00000479440 CLIC2O15247 247 aa16.91■□□□□ 0.3
DDX56-210ENST00000479440 PRKCHP24723 683 aa16.91■□□□□ 0.3
DDX56-210ENST00000479440 AMPD3Q01432 767 aa16.91■□□□□ 0.3
DDX56-210ENST00000479440 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
DDX56-210ENST00000479440 GPRIN1Q7Z2K8 1008 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms