RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 TMLHEQ9NVH6 421 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
RAD51B-208ENST00000479335 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-208ENST00000479335 PAK5Q9P286 719 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-208ENST00000479335 FBXW11Q9UKB1 542 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 ADAM28Q9UKQ2 775 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 NAALADL1Q9UQQ1 740 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 FARP1Q9Y4F1 1045 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-208ENST00000479335 RAD54BQ9Y620 910 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 TTC3P53804 2025 aa10.23□□□□□ -0.77
RAD51B-208ENST00000479335 COL4A4P53420 1690 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-208ENST00000479335 SF3B1O75533 1304 aaKnown RBP eCLIP10.23□□□□□ -0.775e-6■■■■■ 108.4
RAD51B-208ENST00000479335 H7C0C1 242 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 TNFRSF10BO14763 440 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ALOX15BO15296 676 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 B4GALT3O60512 393 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ABHD2P08910 425 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ZSCAN5DPP0CG00 497 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ETS1P14921 441 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CAPN2P17655 700 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CYP2C18P33260 490 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CHKAP35790 457 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 MAGEA11P43364 429 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ATP5OP48047 213 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CXCR3P49682 368 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CACNA2D1P54289 1103 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 GYS2P54840 703 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 KCTD19Q17RG1 926 aaPredicted RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 HFE2Q6ZVN8 426 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CENPUQ71F23 418 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 GPRIN1Q7Z2K8 1008 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 FAM131BQ86XD5 332 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CCDC185Q8N715 623 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 NAT8LQ8N9F0 302 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 OR2W6PQ8NHA6 318 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 C8orf48Q96LL4 319 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 RBM15Q96T37 977 aaKnown RBP eCLIP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ABCC13Q9NSE7 274 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 NLRC5Q86WI3 1866 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 TRIM66O15016 1216 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 NCAM1P13591 858 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 TSHRP16473 764 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 FGFR3P22607 806 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 MAGEA4P43358 317 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CTCFP49711 727 aaPredicted RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 GDF10P55107 478 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 STAT4Q14765 748 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 SLC45A4Q5BKX6 768 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 ZNF280DQ6N043 979 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 MFSD5Q6N075 450 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 C1orf228Q6PIY5 440 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 POTEHQ6S545 545 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 NPNTQ6UXI9 565 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PPP1R21Q6ZMI0 780 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PDZD4Q76G19 769 aaPredicted RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 FAM71DQ8N9W8 422 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 SLC7A14Q8TBB6 771 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CPT1BQ92523 772 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PRCCQ92733 491 aaPredicted RBP10.22□□□□□ -0.77
RAD51B-208ENST00000479335 TLCD1Q96CP7 247 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 SERPINB12Q96P63 405 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 TMEM209Q96SK2 561 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 FERMT1Q9BQL6 677 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 HIPK3Q9H422 1215 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PPCSQ9HAB8 311 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PIGVQ9NUD9 493 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 COMMD8Q9NX08 183 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 NINJ2Q9NZG7 142 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 CALCOCO1Q9P1Z2 691 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
RAD51B-208ENST00000479335 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
RAD51B-208ENST00000479335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.21□□□□□ -0.78
RAD51B-208ENST00000479335 C5orf60A6NFR6 353 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 E7ESA3 106 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 H7C4K7 107 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 RASGRF2O14827 1237 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 CHADO15335 359 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 PQBP1O60828 265 aaKnown RBP10.21□□□□□ -0.78
RAD51B-208ENST00000479335 SHOX2O60902 331 aaPredicted RBP10.21□□□□□ -0.78
RAD51B-208ENST00000479335 GCATO75600 419 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 DGKIO75912 1065 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 AGTP01019 485 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 IVLP07476 585 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 NR1D1P20393 614 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 HTR7P34969 479 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 RFC2P35250 354 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 GRIK1P39086 918 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 MAGEA6P43360 314 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 ARL4CP56559 192 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 PITX1P78337 314 aaPredicted RBP10.21□□□□□ -0.78
RAD51B-208ENST00000479335 FAAP100Q0VG06 881 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 SEMA3BQ13214 749 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 NME3Q13232 169 aa10.21□□□□□ -0.78
RAD51B-208ENST00000479335 EIF4EBP2Q13542 120 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms