RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 A0A1W2PR77 199 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 DFNA5O60443 496 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 SDC3O75056 442 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 PIGRP01833 764 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 ITGB3P05106 788 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 FOXK1P85037 733 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 ZNF174Q15697 407 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 VSTM1Q6UX27 236 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 CRELD2Q6UXH1 353 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-217ENST00000478743 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
HDAC8-217ENST00000478743 CD302Q8IX05 232 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
HDAC8-217ENST00000478743 ZSWIM2Q8NEG5 633 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 SNX29Q8TEQ0 813 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-217ENST00000478743 PCED1BQ96HM7 432 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 CLEC4EQ9ULY5 219 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
HDAC8-217ENST00000478743 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 HUS1O60921 280 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 EPHX1P07099 455 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 XBP1P17861 261 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 PLCG1P19174 1290 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 ANXA13P27216 316 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 MFAP3P55082 362 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 KYAT1Q16773 422 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 TMEM215Q68D42 235 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 FAM26EQ8N5C1 309 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 DUSP9Q99956 384 aaKnown RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 ASB7Q9H672 318 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 PLEKHB1Q9UF11 243 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-217ENST00000478743 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
HDAC8-217ENST00000478743 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 A0A1B0GVM2 712 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 CLDN5O00501 218 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 OPA1O60313 960 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 TBX18O95935 607 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 PPP3CCP48454 512 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 BCAT1P54687 386 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 CDH8P55286 799 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 MDH1BQ5I0G3 518 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 KIAA0895LQ68EN5 471 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 TMEM86AQ8N2M4 240 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
HDAC8-217ENST00000478743 ZNF518BQ9C0D4 1074 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
HDAC8-217ENST00000478743 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 ITGB2P05107 769 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 PCSK1P29120 753 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 NXPH1P58417 271 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 RPS14P62263 151 aaKnown RBP12.94□□□□□ -0.34
HDAC8-217ENST00000478743 GRIN1Q05586 938 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 CLCA4Q14CN2 919 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 DEPDC7Q96QD5 511 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 ARHGAP9Q9BRR9 750 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 KLF16Q9BXK1 252 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-217ENST00000478743 AASDHPPTQ9NRN7 309 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
HDAC8-217ENST00000478743 CDRT15L2A8MXV6 281 aa12.93□□□□□ -0.34
HDAC8-217ENST00000478743 TULP1O00294 542 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-217ENST00000478743 MDM4O15151 490 aa12.93□□□□□ -0.34
HDAC8-217ENST00000478743 YWHAQP27348 245 aa12.93□□□□□ -0.34
HDAC8-217ENST00000478743 PNPLA4P41247 253 aa12.93□□□□□ -0.34
HDAC8-217ENST00000478743 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC8-217ENST00000478743 SMTNP53814 917 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms