RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TKTL1P51854 596 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 RAD23BP54727 409 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SHC2P98077 582 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 BST2Q10589 180 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 EFEMP1Q12805 493 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 CUL2Q13617 745 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 EIF4HQ15056 248 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 EGFLAMQ63HQ2 1017 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 PSAPL1Q6NUJ1 521 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 TMEFF1Q8IYR6 380 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 FMR1NBQ8N0W7 255 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SLC4A11Q8NBS3 891 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 FOXJ1Q92949 421 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 TIGD1Q96MW7 591 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SLC32A1Q9H598 525 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 GDPD2Q9HCC8 539 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SUSD2Q9UGT4 822 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SLC27A6Q9Y2P4 619 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 COQ4Q9Y3A0 265 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 XPO1O14980 1071 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 MDM4O15151 490 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 NDUFS2O75306 463 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 PENKP01210 267 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 CFIP05156 583 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 GABRG2P18507 467 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 CSRP1P21291 193 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 PMLP29590 882 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 ARID5AQ03989 594 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 GFPT1Q06210 699 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 STILQ15468 1287 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 DUOXA1Q1HG43 343 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 GOLGA7BQ2TAP0 167 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 SYCP2LQ5T4T6 812 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 N4BP2L1Q5TBK1 243 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 ANKS1BQ7Z6G8 1248 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 CPXM2Q8N436 756 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 IPO4Q8TEX9 1081 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 SEMA4DQ92854 862 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 BHMTQ93088 406 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 WBP2Q969T9 261 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 EEF2KMTQ96G04 330 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 ARID3AQ99856 593 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 SLC2A11Q9BYW1 496 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 ZDHHC4Q9NPG8 344 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 NUDT5Q9UKK9 219 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 TSPAN16Q9UKR8 245 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 SPAG17Q6Q759 2223 aa15.14■□□□□ 0.01
SMARCE1-209ENST00000478349 KIAA1549LQ6ZVL6 1849 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 SLC12A8A0AV02 714 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 ACACBO00763 2458 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 SYNCRIPO60506 623 aaKnown RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 VDRP11473 427 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 CEACAM1P13688 526 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 WASP42768 502 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 PTGER3P43115 390 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 ST3GAL2Q16842 350 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 CCDC40Q4G0X9 1142 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 PEAR1Q5VY43 1037 aaPredicted RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 SLC23A3Q6PIS1 610 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 ZC3H3Q8IXZ2 948 aaKnown RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 HDDC3Q8N4P3 179 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 ZNF557Q8N988 423 aaPredicted RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 DHTKD1Q96HY7 919 aaPredicted RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 HBS1LQ9Y450 684 aaKnown RBP15.13■□□□□ 0.01
SMARCE1-209ENST00000478349 A0A1W2PQF6 199 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 TIMM44O43615 452 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 LATS1O95835 1130 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 HMBSP08397 361 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 SERPINF2P08697 491 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 PAEPP09466 180 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 GNSP15586 552 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 NDUFV2P19404 249 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 RDXP35241 583 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 IRX4P78413 519 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 ZNF33AQ06730 810 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 ZNF252P-AS1Q0IIN9 211 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 UAP1L1Q3KQV9 507 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 CBWD6Q4V339 395 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 MPPE1Q53F39 396 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 CBWD3Q5JTY5 395 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 WDR45BQ5MNZ6 344 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 CBWD5Q5RIA9 395 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 PM20D1Q6GTS8 502 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 KIAA1324Q6UXG2 1013 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 TOGARAM2Q6ZUX3 1019 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 DENND1CQ8IV53 801 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 SPATA20Q8TB22 786 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 DDI1Q8WTU0 396 aa15.12■□□□□ 0.01
SMARCE1-209ENST00000478349 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms