RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 APBA2Q99767 749 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 VPS11Q9H270 941 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 GBP2P32456 591 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 RPA3P35244 121 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 CHSY1Q86X52 802 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 FUKQ8N0W3 1084 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 CSPG4P5Q96PW8 444 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 KCTD15Q96SI1 283 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 PITPNM3Q9BZ71 974 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 POPDC2Q9HBU9 364 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 EIF2B3Q9NR50 452 aaKnown RBP12.67□□□□□ -0.38
PTPRF-212ENST00000477970 SLC38A7Q9NVC3 462 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
PTPRF-212ENST00000477970 A0A1W2PPM1 405 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 MLNP12872 115 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 CA4P22748 312 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 LMO2P25791 158 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ZNF200P98182 395 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-212ENST00000477970 CDK16Q00536 496 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 PURAQ00577 322 aaKnown RBP12.66□□□□□ -0.38
PTPRF-212ENST00000477970 HP1BP3Q5SSJ5 553 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-212ENST00000477970 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 IGDCC3Q8IVU1 814 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 TMEM86AQ8N2M4 240 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 SLC9A7Q96T83 725 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 CHST12Q9NRB3 414 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ABCF3Q9NUQ8 709 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 TTLL3Q9Y4R7 772 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 RAD54BQ9Y620 910 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 KRT4P19013 534 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 SLC8A3P57103 927 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■■□ 26.5
PTPRF-212ENST00000477970 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 CAND1Q86VP6 1230 aaKnown RBP12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ZNF276Q8N554 614 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 SLC2A14Q8TDB8 520 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 KLC4Q9NSK0 619 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 CHMP2BQ9UQN3 213 aa12.66□□□□□ -0.38
PTPRF-212ENST00000477970 C9IYK1 514 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 SPAG7O75391 227 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 FBXO21O94952 628 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 NOS2P35228 1153 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 NEK3P51956 506 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 GJA9P57773 515 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 SLC1A5Q15758 541 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 OSTM1Q86WC4 334 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 AGGF1Q8N302 714 aaeCLIP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 CLEC4CQ8WTT0 213 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 PHTF1Q9UMS5 762 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 PTGESO14684 152 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 MGRN1O60291 552 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 MYL3P08590 195 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 CCNB1P14635 433 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 NPR3P17342 541 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 ADORA2BP29275 332 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 FDFT1P37268 417 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 RIPK1Q13546 671 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 SLC26A11Q86WA9 606 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 C7orf31Q8N865 590 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 ARRDC4Q8NCT1 418 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 LRRC8CQ8TDW0 803 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 APOPT1Q96IL0 206 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 NPY6RQ99463 290 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 PCNTO95613 3336 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 TRIP12Q14669 1992 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 TFE3P19532 575 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 PAX3P23760 479 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 HHATQ5VTY9 493 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-212ENST00000477970 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 ZNF534Q76KX8 674 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 C4orf33Q8N1A6 199 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 MTBPQ96DY7 904 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 ETNK1Q9HBU6 452 aa12.65□□□□□ -0.38
PTPRF-212ENST00000477970 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms