RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 FOXK2Q01167 660 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 CSRP2Q16527 193 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 PMF1Q6P1K2 205 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 TRIM65Q6PJ69 517 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 TMEM92Q6UXU6 159 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 KBTBD6Q86V97 674 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 C11orf74Q86VG3 221 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 SIX6OS1Q8N1H7 587 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 OLIG1Q8TAK6 271 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 UBA3Q8TBC4 463 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 P2RY11Q96G91 374 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
CNIH4-208ENST00000477413 ABCC13Q9NSE7 274 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 DNAJC17Q9NVM6 304 aaKnown RBP23.69■■□□□ 1.38
CNIH4-208ENST00000477413 STOML2Q9UJZ1 356 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 HCN2Q9UL51 889 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 SLC27A6Q9Y2P4 619 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 PCDHGA5Q9Y5G8 931 aa23.69■■□□□ 1.38
CNIH4-208ENST00000477413 M0QYV0 167 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 SGK1O00141 431 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 KLF8O95600 359 aaPredicted RBP23.68■■□□□ 1.38
CNIH4-208ENST00000477413 LATS1O95835 1130 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 SDHBP21912 280 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 CORO1AP31146 461 aaKnown RBP23.68■■□□□ 1.38
CNIH4-208ENST00000477413 PLK5Q496M5 336 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 FYB2Q5VWT5 728 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 BSPRYQ5W0U4 402 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 RSRC2Q7L4I2 434 aaKnown RBP23.68■■□□□ 1.38
CNIH4-208ENST00000477413 NAT16Q8N8M0 369 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 TXNDC5Q8NBS9 432 aaKnown RBP23.68■■□□□ 1.38
CNIH4-208ENST00000477413 MDGA1Q8NFP4 955 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 THAP9Q9H5L6 903 aa23.68■■□□□ 1.38
CNIH4-208ENST00000477413 AGO1Q9UL18 857 aaKnown RBP23.68■■□□□ 1.38
CNIH4-208ENST00000477413 TBC1D3BA6NDS4 549 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 GFRA2O00451 464 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 FBXO21O94952 628 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 CISD3P0C7P0 127 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 ERCC5P28715 1186 aaPredicted RBP23.67■■□□□ 1.38
CNIH4-208ENST00000477413 TIE1P35590 1138 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 SPEM2Q0P670 501 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 PUM1Q14671 1186 aaKnown RBP eCLIP23.67■■□□□ 1.38
CNIH4-208ENST00000477413 C10orf76Q5T2E6 689 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 CCDC33Q8N5R6 958 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 ZNF513Q8N8E2 541 aaPredicted RBP23.67■■□□□ 1.38
CNIH4-208ENST00000477413 STK32AQ8WU08 396 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 CD248Q9HCU0 757 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 SEMA4GQ9NTN9 838 aa23.67■■□□□ 1.38
CNIH4-208ENST00000477413 ALDH1A2O94788 518 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 IGLV3-27P01718 113 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 PRKCSHP14314 528 aaPredicted RBP23.66■■□□□ 1.38
CNIH4-208ENST00000477413 GPD2P43304 727 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 ZNF445P59923 1031 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 DPCR1Q3MIW9 517 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 CT47A1Q5JQC4 288 aaPredicted RBP23.66■■□□□ 1.38
CNIH4-208ENST00000477413 EMC10Q5UCC4 262 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 TPGS1Q6ZTW0 290 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 NDRG1Q92597 394 aaKnown RBP23.66■■□□□ 1.38
CNIH4-208ENST00000477413 DUSP15Q9H1R2 295 aaPredicted RBP23.66■■□□□ 1.38
CNIH4-208ENST00000477413 APEX2Q9UBZ4 518 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 USP18Q9UMW8 372 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 TNRC6BQ9UPQ9 1833 aaKnown RBP23.66■■□□□ 1.38
CNIH4-208ENST00000477413 NUP205Q92621 2012 aa23.66■■□□□ 1.38
CNIH4-208ENST00000477413 SLC12A8A0AV02 714 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 TRIM24O15164 1050 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 DGKGP49619 791 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 PLA2G2CQ5R387 149 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 ANO7Q6IWH7 933 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 GBP6Q6ZN66 633 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 PRR23CQ6ZRP0 262 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 BEND5Q7L4P6 421 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 FMNL3Q8IVF7 1028 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 SHC3Q92529 594 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 GABRG3Q99928 467 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 IRX2Q9BZI1 471 aaPredicted RBP23.65■■□□□ 1.38
CNIH4-208ENST00000477413 NUP62CLQ9H1M0 184 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 POLMQ9NP87 494 aaPredicted RBP23.65■■□□□ 1.38
CNIH4-208ENST00000477413 UBE2TQ9NPD8 197 aaPredicted RBP23.65■■□□□ 1.38
CNIH4-208ENST00000477413 LAMA1P25391 3075 aa23.65■■□□□ 1.38
CNIH4-208ENST00000477413 PRRT4C9JH25 899 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 MFAP3P55082 362 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 EXOC3L4Q17RC7 722 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 USP39Q53GS9 565 aaKnown RBP23.64■■□□□ 1.37
CNIH4-208ENST00000477413 RNF43Q68DV7 783 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 TOGARAM2Q6ZUX3 1019 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 DENND1CQ8IV53 801 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 FAM114A1Q8IWE2 563 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 ABCA7Q8IZY2 2146 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 RNF139Q8WU17 664 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 SLC2A11Q9BYW1 496 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 LMBRD1Q9NUN5 540 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 DACH1Q9UI36 760 aa23.64■■□□□ 1.37
CNIH4-208ENST00000477413 BECN2A8MW95 431 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 SART1O43290 800 aaKnown RBP23.63■■□□□ 1.37
CNIH4-208ENST00000477413 LTFP02788 710 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 NTSR1P30989 418 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 RING1Q06587 406 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 NNTQ13423 1086 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 CKAP5Q14008 2032 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 ELF2Q15723 593 aa23.63■■□□□ 1.37
CNIH4-208ENST00000477413 MAN2A1Q16706 1144 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms