RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 RNF38Q9H0F5 515 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 SMOC2Q9H3U7 446 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 WDR6Q9NNW5 1121 aaKnown RBP9.69□□□□□ -0.86
PGK1-204ENST00000477335 TLR8Q9NR97 1041 aaKnown RBP9.69□□□□□ -0.86
PGK1-204ENST00000477335 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 PIGVQ9NUD9 493 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 IP6K2Q9UHH9 426 aa9.69□□□□□ -0.86
PGK1-204ENST00000477335 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 M0QYT0 321 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 IRAK2O43187 625 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 TLR5O60602 858 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 OLFM2O95897 454 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 TRUB2O95900 331 aaKnown RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 CEBPBP17676 345 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 IGFBP4P22692 258 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 MIPP30301 263 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 SDC4P31431 198 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 ETF1P62495 437 aaKnown RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 NME3Q13232 169 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 TEAD2Q15562 447 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 CA9Q16790 459 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 MEI1Q5TIA1 1274 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 TXNDC8Q6A555 127 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 AADACL2Q6P093 401 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 CC2D1AQ6P1N0 951 aaPredicted RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 ARHGAP18Q8N392 663 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 MICALL1Q8N3F8 863 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 CCDC185Q8N715 623 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 TRIM58Q8NG06 486 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 RIN3Q8TB24 985 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 SMG7Q92540 1137 aaKnown RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 HES6Q96HZ4 224 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 CYP2S1Q96SQ9 504 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 CDX2Q99626 313 aaPredicted RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 S1PR5Q9H228 398 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 RRAGDQ9NQL2 400 aaPredicted RBP9.68□□□□□ -0.86
PGK1-204ENST00000477335 ASAH2Q9NR71 780 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 KLHL11Q9NVR0 708 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 GPATCH2LQ9NWQ4 482 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 PCSK1NQ9UHG2 260 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 DNAI1Q9UI46 699 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 SNX10Q9Y5X0 201 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
PGK1-204ENST00000477335 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 CAPN9O14815 690 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 XYLBO75191 536 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 IGLV3-27P01718 113 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 TNNT1P13805 278 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 PTPN2P17706 415 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 CTNNA2P26232 953 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 RDXP35241 583 aaKnown RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 GJC1P36383 396 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 PEX5P50542 639 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 DNA2P51530 1060 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 AMPD2Q01433 879 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 DEUP1Q05D60 604 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 EFEMP1Q12805 493 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 TAF12Q16514 161 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 IFI16Q16666 785 aaKnown RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 SMTNL2Q2TAL5 461 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 C10orf120Q5SQS8 335 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 STRADAQ7RTN6 431 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 GPR149Q86SP6 731 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 FAM131BQ86XD5 332 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 ARL14EPQ8N8R7 260 aaPredicted RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 ING5Q8WYH8 240 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 PGAP3Q96FM1 320 aaPredicted RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 SLC39A13Q96H72 371 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 MSLNLQ96KJ4 702 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 ZSWIM3Q96MP5 696 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 PSMB7Q99436 277 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 HERPUD2Q9BSE4 406 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 SNRNP25Q9BV90 132 aaKnown RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 SMG9Q9H0W8 520 aaKnown RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 ATXN3LQ9H3M9 355 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 FAM204AQ9H8W3 233 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 GKN1Q9NS71 199 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 DDIT4Q9NX09 232 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 UXTQ9UBK9 157 aaPredicted RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
PGK1-204ENST00000477335 RASAL2Q9UJF2 1139 aa9.67□□□□□ -0.86
PGK1-204ENST00000477335 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
PGK1-204ENST00000477335 C3orf70A6NLC5 250 aaPredicted RBP9.66□□□□□ -0.86
PGK1-204ENST00000477335 SPOPO43791 374 aa9.66□□□□□ -0.86
PGK1-204ENST00000477335 GREM1O60565 184 aa9.66□□□□□ -0.86
PGK1-204ENST00000477335 SRGAP2O75044 1071 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms