RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CDR1P51861 262 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 BPIFB4P59827 614 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 TSPY1Q01534 308 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 PTK2Q05397 1052 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 KLHL30Q0D2K2 578 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 DMC1Q14565 340 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
LSM2-212ENST00000477182 TAF3Q5VWG9 929 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
LSM2-212ENST00000477182 TMC8Q8IU68 726 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 CRYBG2Q8N1P7 616 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 C12orf29Q8N999 325 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 B3GALNT2Q8NCR0 500 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 SLC20A1Q8WUM9 679 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 ACBD6Q9BR61 282 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 LRRC3Q9BY71 257 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 DNAI2Q9GZS0 605 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 CRTAC1Q9NQ79 661 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 FAM49BQ9NUQ9 324 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 ZNHIT6Q9NWK9 470 aaKnown RBP12.17□□□□□ -0.46
LSM2-212ENST00000477182 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 ASB3Q9Y575 518 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 PI4KAP42356 2102 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 TK2O00142 265 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 THAP12O43422 761 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 EGFP01133 1207 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 SERPING1P05155 500 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 OR4Q2P0C623 313 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 VDRP11473 427 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 CCDC130P13994 396 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 CYP11B1P15538 503 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 ENGP17813 658 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 HNRNPH3P31942 346 aaKnown RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 PRKCIP41743 596 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 PDE6CP51160 858 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 RUNX3Q13761 415 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 MDH1BQ5I0G3 518 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 STXBP5Q5T5C0 1151 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 GPR158Q5T848 1215 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 LRRTM3Q86VH5 581 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 RPLP0P6Q8NHW5 317 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 EPS8L1Q8TE68 723 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 ZSWIM1Q9BR11 485 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 ZCWPW1Q9H0M4 648 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 TMLHEQ9NVH6 421 aa12.16□□□□□ -0.46
LSM2-212ENST00000477182 NOCTQ9UK39 431 aaKnown RBP12.16□□□□□ -0.46
LSM2-212ENST00000477182 ASXL3Q9C0F0 2248 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 TNFRSF10BO14763 440 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 CHRNB2P17787 502 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 ALDH1A3P47895 512 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 MEA1Q16626 185 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 SLC39A12Q504Y0 691 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 FAM171BQ6P995 826 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
LSM2-212ENST00000477182 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 ZNF571Q7Z3V5 609 aaPredicted RBP12.15□□□□□ -0.46
LSM2-212ENST00000477182 SYT12Q8IV01 421 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 DCP1BQ8IZD4 617 aaKnown RBP12.15□□□□□ -0.46
LSM2-212ENST00000477182 TSTD1Q8NFU3 115 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 MYCBPAPQ8TBZ2 947 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 CYFIP2Q96F07 1278 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 PKMYT1Q99640 499 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 CHP1Q99653 195 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
LSM2-212ENST00000477182 ARHGAP20Q9P2F6 1191 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 GTF3C4Q9UKN8 822 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 INVSQ9Y283 1065 aa12.15□□□□□ -0.46
LSM2-212ENST00000477182 CELSR3Q9NYQ7 3312 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 SHROOM3Q8TF72 1996 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 APC2O95996 2303 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 O00370 1275 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 CLDN5O00501 218 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 OPHN1O60890 802 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 MMEP08473 750 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 FECHP22830 423 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 ADORA2BP29275 332 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms