RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CASP10Q92851 521 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 SMOC2Q9H3U7 446 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 ENTPD7Q9NQZ7 604 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 DMGDHQ9UI17 866 aaKnown RBP29.99■■■□□ 2.39
VEGFA-211ENST00000476772 LAMA2P24043 3122 aaKnown RBP29.99■■■□□ 2.39
VEGFA-211ENST00000476772 DNAJB1P25685 340 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 L1CAMP32004 1257 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 CHRNA3P32297 505 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 PPP6R3Q5H9R7 873 aaPredicted RBP29.98■■■□□ 2.39
VEGFA-211ENST00000476772 RFX6Q8HWS3 928 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 TCEAL8Q8IYN2 117 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 KCTD15Q96SI1 283 aaPredicted RBP29.98■■■□□ 2.39
VEGFA-211ENST00000476772 DCLK3Q9C098 648 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 LRRC19Q9H756 370 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 TLR8Q9NR97 1041 aaKnown RBP29.98■■■□□ 2.39
VEGFA-211ENST00000476772 MTMR10Q9NXD2 777 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 SFMBT1Q9UHJ3 866 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 TARSL2A2RTX5 802 aaKnown RBP29.98■■■□□ 2.39
VEGFA-211ENST00000476772 C5orf67F2Z3F1 127 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 CA3P07451 260 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 IL4RP24394 825 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 ALDH1A3P47895 512 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 CXCR3P49682 368 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 DYNLT1P63172 113 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 PLPP4Q5VZY2 271 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 SND1Q7KZF4 910 aaKnown RBP eCLIP29.98■■■□□ 2.393e-9■□□□□ 9.8
VEGFA-211ENST00000476772 PSTKQ8IV42 348 aaKnown RBP29.98■■■□□ 2.39
VEGFA-211ENST00000476772 PYROXD2Q8N2H3 581 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 NTAN1Q96AB6 310 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 KLHL5Q96PQ7 755 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 ANLNQ9NQW6 1124 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.98■■■□□ 2.392e-7■■■■□ 22.2
VEGFA-211ENST00000476772 FBXW11Q9UKB1 542 aa29.98■■■□□ 2.39
VEGFA-211ENST00000476772 IRAK2O43187 625 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 CST8O60676 142 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 GBP1P32455 592 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 COILP38432 576 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-211ENST00000476772 EIF4EBP2Q13542 120 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-211ENST00000476772 BBS12Q6ZW61 710 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 CCDC26Q8TAB7 109 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 FAM118BQ9BPY3 351 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 HINFPQ9BQA5 517 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 CLIC5Q9NZA1 410 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 MAFFQ9ULX9 164 aa29.97■■■□□ 2.39
VEGFA-211ENST00000476772 TGM5O43548 720 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 SPATA31D3P0C874 917 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 RARGP13631 454 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 ADRA1BP35368 520 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 PSEN1P49768 467 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 TWF1Q12792 350 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 SNX1Q13596 522 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 MSANTD2Q6P1R3 559 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 CCDC137Q6PK04 289 aaKnown RBP29.96■■■□□ 2.39
VEGFA-211ENST00000476772 SPATA31D4Q6ZUB0 917 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 ZNF670Q9BS34 389 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 TLR9Q9NR96 1032 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.96■■■□□ 2.39
VEGFA-211ENST00000476772 INSL5Q9Y5Q6 135 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 IRAK3Q9Y616 596 aa29.96■■■□□ 2.39
VEGFA-211ENST00000476772 I6L893 689 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 TTI1O43156 1089 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 MSI1O43347 362 aaKnown RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 ZMYND10O75800 440 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 HEXIM1O94992 359 aaKnown RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 ZDHHC11BP0C7U3 371 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 CSH1P0DML2 217 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 CSH2P0DML3 217 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 HMGA1P17096 107 aaKnown RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 FNTAP49354 379 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 AIF1P55008 147 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 KCTD19Q17RG1 926 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 EFHC2Q5JST6 749 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 VSIG1Q86XK7 387 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 HAUS1Q96CS2 278 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 RNF157Q96PX1 679 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 MAK16Q9BXY0 300 aaKnown RBP29.95■■■□□ 2.39
VEGFA-211ENST00000476772 WDCPQ9H6R7 721 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 STIM2Q9P246 746 aa29.95■■■□□ 2.39
VEGFA-211ENST00000476772 HIDE1A8MVS5 230 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 ADH1AP07327 375 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 KCNJ1P48048 391 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 UBE3AQ05086 875 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 SCAPQ12770 1279 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 ANKRD20A8PQ5CZ79 823 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 MAATS1Q7Z4T9 603 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 ANKRD7Q92527 254 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 FAF2Q96CS3 445 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 EMILIN2Q9BXX0 1053 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 PCYOX1Q9UHG3 505 aa29.95■■■□□ 2.38
VEGFA-211ENST00000476772 C2orf71A6NGG8 1288 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 RB1P06400 928 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 VSNL1P62760 191 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 DR1Q01658 176 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 VEPH1Q14D04 833 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 CCNG2Q16589 344 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 ARL13BQ3SXY8 428 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 RNF34Q969K3 372 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 UBE2OQ9C0C9 1292 aaKnown RBP29.94■■■□□ 2.38
VEGFA-211ENST00000476772 TKTL2Q9H0I9 626 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 HOMER3Q9NSC5 361 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms