RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 CNOT7Q9UIV1 285 aaKnown RBP7.4□□□□□ -1.22
LRCH3-215ENST00000476664 CAMK2AQ9UQM7 478 aa7.4□□□□□ -1.22
LRCH3-215ENST00000476664 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
LRCH3-215ENST00000476664 KTN1Q86UP2 1357 aaKnown RBP7.4□□□□□ -1.22
LRCH3-215ENST00000476664 FLT1P17948 1338 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 UBE2CO00762 179 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 KLK10O43240 276 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 UNC5CO95185 931 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 PLATP00750 562 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 GRPP07492 148 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 MSL3P1P0C860 447 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 SRGAP2BP0DMP2 458 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 ATP5F1P24539 256 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 SERPINA4P29622 427 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 EEF1DP29692 281 aaKnown RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 HOXC9P31274 260 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 SLC5A2P31639 672 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 AKT1P31749 480 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 UCP3P55916 312 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 WNT3AP56704 352 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 PPARDQ03181 441 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 UBXN1Q04323 297 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 BFSP1Q12934 665 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 ADAM15Q13444 863 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 CAMK1Q14012 370 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 C11orf88Q6PI97 169 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 OLFM4Q6UX06 510 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 TAS1R1Q7RTX1 841 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 SLFN11Q7Z7L1 901 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 CLEC10AQ8IUN9 316 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 EPHX4Q8IUS5 362 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 UNC45BQ8IWX7 931 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 ARMC10Q8N2F6 343 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 SLC22A17Q8WUG5 538 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 LENG1Q96BZ8 264 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 ZNF333Q96JL9 665 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 GUCD1Q96NT3 240 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 CPEB1Q9BZB8 566 aaKnown RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 MS4A7Q9GZW8 240 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 C11orf54Q9H0W9 315 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-215ENST00000476664 VPS16Q9H269 839 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 TRPV4Q9HBA0 871 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 HCFC1R1Q9NWW0 138 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 ZSCAN32Q9NX65 697 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 PCDHGB5Q9Y5G0 923 aa7.39□□□□□ -1.23
LRCH3-215ENST00000476664 AQP7P3A6NL99 342 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 STX16-NPEPL1H3BU86 382 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 INO80B-WBP1J3KQ70 363 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 CHL1O00533 1208 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 STX16O14662 325 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 DHX15O43143 795 aaKnown RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 GJB3O75712 270 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 VIPP01282 170 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 GASTP01350 101 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 THEGLP0DJG4 465 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 XRCC6P12956 609 aaKnown RBP eCLIP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 PRKCAP17252 672 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 ATF7P17544 494 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 MST1P26927 711 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 EIF2DP41214 584 aaKnown RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 PHKA1P46020 1223 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 RPS3AP61247 264 aaKnown RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 RBP5P82980 135 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 INSCQ1MX18 579 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 BTBD16Q32M84 506 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 AMOTQ4VCS5 1084 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 ZNF362Q5T0B9 420 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 IKBIPQ70UQ0 350 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 SYT13Q7L8C5 426 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 TTC30AQ86WT1 665 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 NPAS3Q8IXF0 933 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 CCDC105Q8IYK2 499 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 ULK2Q8IYT8 1036 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 NUP93Q8N1F7 819 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 RUFY2Q8WXA3 655 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 ZNF653Q96CK0 615 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 GRAMD1AQ96CP6 724 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 TSPY26PQ9H489 355 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 FAM83DQ9H4H8 585 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 BRF2Q9HAW0 419 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 SAE1Q9UBE0 346 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-215ENST00000476664 DNAI1Q9UI46 699 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 SNX11Q9Y5W9 270 aa7.38□□□□□ -1.23
LRCH3-215ENST00000476664 BAHCC1Q9P281 2608 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 H0Y858 1186 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 SH2B2O14492 632 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-215ENST00000476664 PSMA7O14818 248 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 CCNT2O60583 730 aaKnown RBP7.37□□□□□ -1.23
LRCH3-215ENST00000476664 PPP6R2O75170 966 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 USP2O75604 605 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-215ENST00000476664 GJB1P08034 283 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 UBL4AP11441 157 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 CPA1P15085 419 aa7.37□□□□□ -1.23
LRCH3-215ENST00000476664 KLRK1P26718 216 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms