RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 GNASQ5JWF2 1037 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 LVRNQ6Q4G3 990 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 RTP4Q96DX8 246 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 TNIP3Q96KP6 325 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 PRKAG3Q9UGI9 489 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 GSTA1P08263 222 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 MATKP42679 507 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 SPARCL1Q14515 664 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 KLHL38Q2WGJ6 581 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 ACCSLQ4AC99 568 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 HSFY1Q96LI6 401 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 GAD1Q99259 594 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 DUSP16Q9BY84 665 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 PLAC1Q9HBJ0 212 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 MIOSQ9NXC5 875 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 DTLQ9NZJ0 730 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 SENP1Q9P0U3 644 aa17.25■□□□□ 0.35
TVP23B-202ENST00000476139 SMG5Q9UPR3 1016 aaKnown RBP17.25■□□□□ 0.35
TVP23B-202ENST00000476139 SMAPO00193 183 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 PGK1P00558 417 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 MAP3K7CLP57077 242 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 BNIP1Q12981 228 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 GALNTL6Q49A17 601 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 RASAL3Q86YV0 1011 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 CYTH2Q99418 400 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 LGMNQ99538 433 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 SLC17A7Q9P2U7 560 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 PHTF1Q9UMS5 762 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 XPO1O14980 1071 aaKnown RBP17.24■□□□□ 0.35
TVP23B-202ENST00000476139 ADRA1DP25100 572 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 ACADSBP45954 432 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 SULT1E1P49888 294 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 NCBP2-AS2Q69YL0 99 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 CCDC91Q7Z6B0 441 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 TCP10LQ8TDR4 215 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 KCNK16Q96T55 309 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 HNRNPABQ99729 332 aaKnown RBP17.24■□□□□ 0.35
TVP23B-202ENST00000476139 PAAF1Q9BRP4 392 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 TSPYL2Q9H2G4 693 aaPredicted RBP17.24■□□□□ 0.35
TVP23B-202ENST00000476139 CDY2AQ9Y6F7 541 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
TVP23B-202ENST00000476139 CXorf49A8MYA2 514 aaPredicted RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 TNPO2O14787 897 aaKnown RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 MAP2K2P36507 400 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 RGS2P41220 211 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 CLCNKBP51801 687 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 NME3Q13232 169 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 CLEC20AQ6ZU45 233 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 NME8Q8N427 588 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 ADAM32Q8TC27 787 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 SERAC1Q96JX3 654 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 KATNAL1Q9BW62 490 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 FETUBQ9UGM5 382 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 NPR3P17342 541 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 HOXC8P31273 242 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 SLC25A52Q3SY17 297 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 SLC45A4Q5BKX6 768 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 EFHC1Q5JVL4 640 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 OTUD1Q5VV17 481 aaPredicted RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 MPP5Q8N3R9 675 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 STAMBPL1Q96FJ0 436 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 TMEM237Q96Q45 408 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 PPCSQ9HAB8 311 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 TMEM30AQ9NV96 361 aa17.23■□□□□ 0.35
TVP23B-202ENST00000476139 DDX43Q9NXZ2 648 aaKnown RBP17.23■□□□□ 0.35
TVP23B-202ENST00000476139 GNAT1P11488 350 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 SLC18A1P54219 525 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 PTK7Q13308 1070 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 PDK4Q16654 411 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 GDF6Q6KF10 455 aaPredicted RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 ARCQ7LC44 396 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 TP53INP2Q8IXH6 220 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 TOP6BLQ8N6T0 577 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 MED10Q9BTT4 135 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CEP41Q9BYV8 373 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 MYLK2Q9H1R3 596 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 PIH1D1Q9NWS0 290 aaKnown RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 ZC3H7BQ9UGR2 993 aaKnown RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 USP3Q9Y6I4 520 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 NRP1O14786 923 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 C1QAP02745 245 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
TVP23B-202ENST00000476139 CACNA2D1P54289 1103 aa17.22■□□□□ 0.35
TVP23B-202ENST00000476139 NBPF20Q3BBV1 942 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms