RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ZDHHC4Q9NPG8 344 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 DNAJC17Q9NVM6 304 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 STRIP2Q9ULQ0 834 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 RALGAPA1Q6GYQ0 2036 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 M0QYV0 167 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 RNF225M0QZC1 329 aaPredicted RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 O00370 1275 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 PIK3R2O00459 728 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 GREM1O60565 184 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 STC2O76061 302 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 KLF8O95600 359 aaPredicted RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 CALCAP01258 141 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 RETP07949 1114 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 SETSIPP0DME0 302 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 KRT5P13647 590 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 TYRP14679 529 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 CORO1AP31146 461 aaKnown RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 TNFRSF4P43489 277 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 GCNT1Q02742 428 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 C10orf76Q5T2E6 689 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 ANO7Q6IWH7 933 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 LCLAT1Q6UWP7 414 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 CACNA2D4Q7Z3S7 1137 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 ZNF276Q8N554 614 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 IL17RCQ8NAC3 791 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 MLKLQ8NB16 471 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 TXNDC5Q8NBS9 432 aaKnown RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 RBBP8NLQ8NC74 664 aaPredicted RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 LMO3Q8TAP4 145 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 TFAP2BQ92481 460 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 CNOT6LQ96LI5 555 aaKnown RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 TPSD1Q9BZJ3 242 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 INTS2Q9H0H0 1204 aaKnown RBP9.88□□□□□ -0.83
PDPN-204ENST00000475043 PLK2Q9NYY3 685 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 MARCH2Q9P0N8 246 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 WDR35Q9P2L0 1181 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 MMP17Q9ULZ9 603 aa9.88□□□□□ -0.83
PDPN-204ENST00000475043 FRYLO94915 3013 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 A0A0A0MRY4 1105 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 SLC12A8A0AV02 714 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 SGK1O00141 431 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 TRIM24O15164 1050 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 ALDH1A2O94788 518 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 KLKB1P03952 638 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 GBP1P32455 592 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 CHKAP35790 457 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 KIR2DL1P43626 348 aaPredicted RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 MTIF2P46199 727 aaKnown RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 RGS7P49802 495 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 LMNB2Q03252 620 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 STILQ15468 1287 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 CNGA2Q16280 664 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 CRY1Q16526 586 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 EOGTQ5NDL2 527 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 PM20D1Q6GTS8 502 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 GRAMD4Q6IC98 578 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 DENND1CQ8IV53 801 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 ZNF513Q8N8E2 541 aaPredicted RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 TERB1Q8NA31 727 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 KCTD13Q8WZ19 329 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 EDEM1Q92611 657 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 RMDN1Q96DB5 314 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 CRACR2AQ9BSW2 395 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 DCLK3Q9C098 648 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 NUP62CLQ9H1M0 184 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 CLSTN2Q9H4D0 955 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 POLMQ9NP87 494 aaPredicted RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 PARD6AQ9NPB6 346 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 UBE2TQ9NPD8 197 aaPredicted RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 OLA1Q9NTK5 396 aaKnown RBP9.87□□□□□ -0.83
PDPN-204ENST00000475043 BCCIPQ9P287 314 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDPN-204ENST00000475043 EBF1Q9UH73 591 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDPN-204ENST00000475043 INVSQ9Y283 1065 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 ZNF510Q9Y2H8 683 aa9.87□□□□□ -0.83
PDPN-204ENST00000475043 YJEFN3A6XGL0 299 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 E7ENQ6 273 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 DCLK1O15075 740 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 CACNG3O60359 315 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 CYBBP04839 570 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 USP8P40818 1118 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 HARS2P49590 506 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 DGKGP49619 791 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 MFAP3P55082 362 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 DAOAP59103 153 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 ELF2Q15723 593 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 RSPO4Q2I0M5 234 aaPredicted RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 HSF5Q4G112 596 aaPredicted RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 USP39Q53GS9 565 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 BSPRYQ5W0U4 402 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 PMF1Q6P1K2 205 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 TRIM65Q6PJ69 517 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 Q6ZNB5 142 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms