RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	ANKRD36BP1	Q96IX9	119 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	RHBDL2	Q9NX52	303 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	HBS1L	Q9Y450	684 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TEX264	Q9Y6I9	313 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CAPN15	O75808	1086 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	FAM163B	P0C2L3	166 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ADORA2A	P29274	412 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	COPA	P53621	1224 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ACTR3	P61158	418 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ITGA9	Q13797	1035 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NET1	Q7Z628	596 aa	Predicted RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SPATA24	Q86W54	205 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TRIM42	Q8IWZ5	723 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	USP13	Q92995	863 aa	Predicted RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CNBD2	Q96M20	576 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PHF12	Q96QT6	1004 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	RSAD1	Q9HA92	442 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NOP56	O00567	594 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NELFE	P18615	380 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	EIF4B	P23588	611 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	STIP1	P31948	543 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SLC1A6	P48664	564 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	AMHR2	Q16671	573 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CA9	Q16790	459 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	LIN52	Q52LA3	116 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ILDR2	Q71H61	639 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NIM1K	Q8IY84	436 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	EZH1	Q92800	747 aa	Predicted RBP	12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PORCN	Q9H237	461 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	VCX3B	Q9H321	246 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	VCX3A	Q9NNX9	186 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ETNK2	Q9NVF9	386 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ADAMTS6	Q9UKP5	1117 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PLA2G4C	Q9UP65	541 aa		12.49	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NDC80	O14777	642 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	RFPL1	O75677	317 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MICAL2	O94851	1124 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	METTL18	O95568	372 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PRKCB	P05771	671 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SUPT20HL2	P0C7V6	817 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TYK2	P29597	1187 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CXCL9	Q07325	125 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SUPT20HL1	Q3ZLR7	823 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ARHGAP22	Q7Z5H3	698 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	C10orf107	Q8IVU9	208 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MPP4	Q96JB8	637 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TTLL3	Q9Y4R7	772 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MYO18A	Q92614	2054 aa	Known RBP	12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	GOLGA8T	H3BQL2	631 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	APOL1	O14791	398 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PEX1	O43933	1283 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	DNAJC6	O75061	913 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	USP12	O75317	370 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TGDS	O95455	350 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	APOE	P02649	317 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SPATA31D3	P0C874	917 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NAMPT	P43490	491 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TAP1	Q03518	808 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SLC18A2	Q05940	514 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	OLIG2	Q13516	323 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TFDP2	Q14188	446 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MTHFD1L	Q6UB35	978 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SPATA31D4	Q6ZUB0	917 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CMC1	Q7Z7K0	106 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CHSY1	Q86X52	802 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	XYLT1	Q86Y38	959 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MAP7D3	Q8IWC1	876 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	NME8	Q8N427	588 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ICA1L	Q8NDH6	482 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.48	□□□□□ -0.41	5e-8	■■□□□ 12.2
SKIV2L-208	ENST00000474839	PPP2R3C	Q969Q6	453 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MARK4	Q96L34	752 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	B3GNT5	Q9BYG0	378 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	S100A14	Q9HCY8	104 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MRPL42	Q9Y6G3	142 aa	Known RBP	12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	DNAH12	Q6ZR08	3092 aa		12.48	□□□□□ -0.41
SKIV2L-208	ENST00000474839	WNT10B	O00744	389 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	TPP1	O14773	563 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MED7	O43513	233 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	LSM8	O95777	96 aa	Known RBP	12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	BPGM	P07738	259 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MLH1	P40692	756 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PKNOX1	P55347	436 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	GBE1	Q04446	702 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SPDYA	Q5MJ70	313 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	EEF1DP3	Q658K8	133 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PAOX	Q6QHF9	649 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	ABHD15	Q6UXT9	468 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	DHDDS	Q86SQ9	333 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	CEP70	Q8NHQ1	597 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	DHRS4	Q9BTZ2	278 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SPATA16	Q9BXB7	569 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MRPL4	Q9BYD3	311 aa	Known RBP	12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	KLHL4	Q9C0H6	718 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	SSU72	Q9NP77	194 aa	Known RBP	12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	BTBD7	Q9P203	1132 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	PAK5	Q9P286	719 aa		12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	RPL26L1	Q9UNX3	145 aa	Known RBP	12.47	□□□□□ -0.41
SKIV2L-208	ENST00000474839	MAGEC1	O60732	1142 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms