RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 COG7P83436 770 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 EFEMP1Q12805 493 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 KCNJ12Q14500 433 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 EMC10Q5UCC4 262 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 GBP6Q6ZN66 633 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 C11orf57Q6ZUT1 292 aaPredicted RBP15.87■□□□□ 0.13
VARS-223ENST00000474643 CCDC186Q7Z3E2 898 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 IRF2BP1Q8IU81 584 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 SFTPA1Q8IWL2 248 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 ANKRD20A12PQ8NF67 263 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 EDEM2Q9BV94 578 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 KLF16Q9BXK1 252 aaPredicted RBP15.87■□□□□ 0.13
VARS-223ENST00000474643 FAM124BQ9H5Z6 455 aaPredicted RBP15.87■□□□□ 0.13
VARS-223ENST00000474643 SAMSN1Q9NSI8 373 aaKnown RBP15.87■□□□□ 0.13
VARS-223ENST00000474643 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.87■□□□□ 0.13
VARS-223ENST00000474643 ZNF510Q9Y2H8 683 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 PCDHB4Q9Y5E5 795 aa15.87■□□□□ 0.13
VARS-223ENST00000474643 SPAG17Q6Q759 2223 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 KHNYNO15037 678 aaKnown RBP15.86■□□□□ 0.13
VARS-223ENST00000474643 CYBBP04839 570 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 NTSR1P30989 418 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 WASP42768 502 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 DGKGP49619 791 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 MYL5Q02045 173 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 GOLGA7BQ2TAP0 167 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 SGO2Q562F6 1265 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 STPG1Q5TH74 334 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 PMS2CLQ68D20 193 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 TMEM92Q6UXU6 159 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 ARMCX6Q7L4S7 300 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 RRAGAQ7L523 313 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 SIX6OS1Q8N1H7 587 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 KCNV2Q8TDN2 545 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 RNF139Q8WU17 664 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 DCLK3Q9C098 648 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 NMUR1Q9HB89 426 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 LRRC4Q9HBW1 653 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 OSER1Q9NX31 292 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 CLIC5Q9NZA1 410 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 SDK1Q7Z5N4 2213 aa15.86■□□□□ 0.13
VARS-223ENST00000474643 KIAA1549LQ6ZVL6 1849 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 BCLAF3A2AJT9 711 aaKnown RBP15.85■□□□□ 0.13
VARS-223ENST00000474643 HHLA1C9JL84 531 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 CDK11BP21127 795 aaKnown RBP15.85■□□□□ 0.13
VARS-223ENST00000474643 EEF1GP26641 437 aaKnown RBP15.85■□□□□ 0.13
VARS-223ENST00000474643 CHKAP35790 457 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 PGFP49763 221 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 LIMK1P53667 647 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 BCAT1P54687 386 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 RAD23BP54727 409 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 MESP2Q0VG99 397 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 EXOC3L4Q17RC7 722 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 ZSCAN23Q3MJ62 389 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 TCP11X2Q5H9J9 407 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 TCEAL6Q6IPX3 200 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 TMEM270Q6UE05 265 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 RASSF3Q86WH2 238 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 ETFBKMTQ8IXQ9 262 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 SLC4A11Q8NBS3 891 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 PIGKQ92643 395 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 TCEAL3Q969E4 200 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 WBP2Q969T9 261 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 NDST4Q9H3R1 872 aa15.85■□□□□ 0.13
VARS-223ENST00000474643 UBE2TQ9NPD8 197 aaPredicted RBP15.85■□□□□ 0.13
VARS-223ENST00000474643 CACNG3O60359 315 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 KRT5P13647 590 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 BCKDHBP21953 392 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 KIR2DL1P43626 348 aaPredicted RBP15.84■□□□□ 0.13
VARS-223ENST00000474643 TKTL1P51854 596 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 MFAP3P55082 362 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 YWHAGP61981 247 aaKnown RBP eCLIP15.84■□□□□ 0.13
VARS-223ENST00000474643 ARID5AQ03989 594 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 STARD3Q14849 445 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 PLA2G2CQ5R387 149 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 DAB2IPQ5VWQ8 1189 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 PIGZQ86VD9 579 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 ARHGEF19Q8IW93 802 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 ANKRD52Q8NB46 1076 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 LMO3Q8TAP4 145 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 GOLGA1Q92805 767 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 FAM81BQ96LP2 452 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 FANCLQ9NW38 375 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 TAB2Q9NYJ8 693 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 PLK2Q9NYY3 685 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 MARCH2Q9P0N8 246 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 TSPAN16Q9UKR8 245 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 NCOR2Q9Y618 2525 aa15.84■□□□□ 0.13
VARS-223ENST00000474643 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 SLC12A8A0AV02 714 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 GTPBP10A4D1E9 387 aaKnown RBP15.83■□□□□ 0.12
VARS-223ENST00000474643 ANTXRLA6NF34 631 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 STC2O76061 302 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 ZBED1O96006 694 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 SLC9A1P19634 815 aa15.83■□□□□ 0.12
VARS-223ENST00000474643 CORO1AP31146 461 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms