RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 HOXA9P31269 272 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 PTPN7P35236 360 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 RFC1P35251 1148 aaPredicted RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 FNTAP49354 379 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 PEX5P50542 639 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 RPL7AP62424 266 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 SKIV2LQ15477 1246 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 ANKRD54Q6NXT1 300 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 WDR93Q6P2C0 686 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 OLFML1Q6UWY5 402 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 SYDE1Q6ZW31 735 aaPredicted RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 SND1Q7KZF4 910 aaKnown RBP eCLIP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 PSTKQ8IV42 348 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 DOCK8Q8NF50 2099 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 SMG7Q92540 1137 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 FAM149B1Q96BN6 582 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 PRKD2Q9BZL6 878 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 FAM129AQ9BZQ8 928 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 HCFC1R1Q9NWW0 138 aa14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 UTP11Q9Y3A2 253 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-204ENST00000474283 FAM187AA6NFU0 413 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 C2CD4BA6NLJ0 364 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 PHF2O75151 1096 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 F9P00740 461 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 KRT1P04264 644 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 MYL4P12829 197 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 HMGA1P17096 107 aaKnown RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 PTPN2P17706 415 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 ZNF135P52742 658 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 DAOAP59103 153 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 TAF10Q12962 218 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 TFDP2Q14188 446 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 PDK2Q15119 407 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 STRADAQ7RTN6 431 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 GRASPQ7Z6J2 395 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 SLC13A5Q86YT5 568 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 TSC1Q92574 1164 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 BTBD6Q96KE9 485 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 SLITRK1Q96PX8 696 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 TTLL2Q9BWV7 592 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 MAK16Q9BXY0 300 aaKnown RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 POPDC2Q9HBU9 364 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 ASAH2Q9NR71 780 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 COMMD8Q9NX08 183 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 GMIPQ9P107 970 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 STIM2Q9P246 746 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 UXTQ9UBK9 157 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 CHORDC1Q9UHD1 332 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 SCML2Q9UQR0 700 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 USP3Q9Y6I4 520 aa14.27□□□□□ -0.13
LDLRAP1-204ENST00000474283 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 TBX10O75333 385 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 DAB1O75553 588 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 GRAP2O75791 330 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 GJB6O95452 261 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 NOS2P35228 1153 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 MATKP42679 507 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 DLX2Q07687 328 aaPredicted RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 C2orf54Q08AI8 447 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 GPS2Q13227 327 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 MTA1Q13330 715 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 CUL1Q13616 776 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 TFDP3Q5H9I0 405 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 BEND5Q7L4P6 421 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 RXFP2Q8WXD0 754 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 ANKRD7Q92527 254 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 ALG3Q92685 438 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 ZNF707Q96C28 371 aaPredicted RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 PABPC5Q96DU9 382 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 PIWIL1Q96J94 861 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 MS4A14Q96JA4 679 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 FERMT1Q9BQL6 677 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 TLR8Q9NR97 1041 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 IL37Q9NZH6 218 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 TMEM59LQ9UK28 342 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 USP18Q9UMW8 372 aa14.26□□□□□ -0.13
LDLRAP1-204ENST00000474283 EYSQ5T1H1 3165 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 C5orf42Q9H799 3197 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 A0A1W2PQH9 124 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 LRRD1A4D1F6 860 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 YJEFN3A6XGL0 299 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 E7ENQ6 273 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 RHOP08100 348 aa14.25□□□□□ -0.13
LDLRAP1-204ENST00000474283 RHOXF2BP0C7M4 288 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms