RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 RANBP10Q6VN20 620 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 MAFAQ8NHW3 353 aaPredicted RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 DNAJB14Q8TBM8 379 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 HIPK2Q9H2X6 1198 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 MID2Q9UJV3 735 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 CDC23Q9UJX2 597 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 ITGB1BP2Q9UKP3 347 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 PROCRQ9UNN8 238 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 DRG1Q9Y295 367 aaKnown RBP4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 ZMYM2Q9UBW7 1377 aa4.25□□□□□ -1.73
TMEM50B-208ENST00000474272 A0A087WZ62 844 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 CLCA1A8K7I4 914 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 CYSRT1A8MQ03 144 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 RASSF9O75901 435 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 PPM1AP35813 382 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 ME1P48163 572 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 SUMO2P61956 95 aaKnown RBP4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 STK3Q13188 491 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 SEMA3AQ14563 771 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 TWIST1Q15672 202 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 MPEG1Q2M385 716 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 C1orf228Q6PIY5 440 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 DCDC5Q6ZRR9 648 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 COLCA1Q6ZS62 124 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 PTCHD4Q6ZW05 846 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 ANKRD13BQ86YJ7 626 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 RBMXL3Q8N7X1 1067 aaKnown RBP4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 IGFBPL1Q8WX77 278 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 BRI3BPQ8WY22 251 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 CTHRC1Q96CG8 243 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 ZBTB45Q96K62 511 aaPredicted RBP4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 ZNF212Q9UDV6 495 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 HDAC9Q9UKV0 1011 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 TTC3P53804 2025 aa4.24□□□□□ -1.73
TMEM50B-208ENST00000474272 LOC102723971A0A1B0GUV8 181 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 H7C4K7 107 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 THAP12O43422 761 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 SPRY2O43597 315 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 OAZ2O95190 189 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 XRCC6P12956 609 aaKnown RBP eCLIP4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 ATF7P17544 494 aaPredicted RBP4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 ACVR2AP27037 513 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 HSPA7P48741 367 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 CFHR1Q03591 330 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 BTKQ06187 659 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 ERV3-1Q14264 604 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 LARS2Q15031 903 aaKnown RBP4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 FAM83BQ5T0W9 1011 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 RRAGBQ5VZM2 374 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 ZNF549Q6P9A3 640 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 RNF44Q7L0R7 432 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 KCTD20Q7Z5Y7 419 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 PIM3Q86V86 326 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 SPARTQ8N0X7 666 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 POF1BQ8WVV4 589 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 RSPRY1Q96DX4 576 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 LYZL4Q96KX0 146 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 PPP1R9BQ96SB3 815 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 CRB3Q9BUF7 120 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 WDR12Q9GZL7 423 aaKnown RBP4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 PTPRHQ9HD43 1115 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 XPNPEP3Q9NQH7 507 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 TBC1D23Q9NUY8 699 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 HS3ST3B1Q9Y662 390 aa4.23□□□□□ -1.73
TMEM50B-208ENST00000474272 B4DGG1 531 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 RAB27BO00194 218 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 SMAD6O43541 496 aaKnown RBP4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 RRP9O43818 475 aaKnown RBP4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 TOMM40O96008 361 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 CTSAP10619 480 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 CREB1P16220 341 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 THBS4P35443 961 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 TRAPPC10P48553 1259 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 CCNIQ14094 377 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 NPY5RQ15761 445 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 ARL13BQ3SXY8 428 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 CERCAMQ5T4B2 595 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 ERAP2Q6P179 960 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 DLK2Q6UY11 383 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 YAF2Q8IY57 180 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 PELI3Q8N2H9 469 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 C18orf8Q96DM3 657 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 LRRC46Q96FV0 321 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 HS6ST2Q96MM7 605 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 PSMD1Q99460 953 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 GDF15Q99988 308 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 FAM234AQ9H0X4 552 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 ARFGAP3Q9NP61 516 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 DNMT3BQ9UBC3 853 aaKnown RBP4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 MGAT4CQ9UBM8 478 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 USP22Q9UPT9 525 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 RIPOR2Q9Y4F9 1068 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 CDY1Q9Y6F8 540 aa4.22□□□□□ -1.73
TMEM50B-208ENST00000474272 A0A087WV62 115 aa4.21□□□□□ -1.74
TMEM50B-208ENST00000474272 F5H423 210 aaPredicted RBP4.21□□□□□ -1.74
TMEM50B-208ENST00000474272 CLIC1O00299 241 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms