RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CAVIN2O95810 425 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 SETSIPP0DME0 302 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 NTSR1P30989 418 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 CORO1AP31146 461 aaKnown RBP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 DGKGP49619 791 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 CETN1Q12798 172 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 MAP7D1Q3KQU3 841 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 EGFLAMQ63HQ2 1017 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 TMEM270Q6UE05 265 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 LCLAT1Q6UWP7 414 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 TRIM59Q8IWR1 403 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 SCML4Q8N228 414 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 UBA3Q8TBC4 463 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 HMGB4Q8WW32 186 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 RLN3Q8WXF3 142 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 TFAP2BQ92481 460 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 NDRG1Q92597 394 aaKnown RBP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 ZSWIM1Q9BR11 485 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 PLK2Q9NYY3 685 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 AGO1Q9UL18 857 aaKnown RBP16.55■□□□□ 0.24
CDPF1-205ENST00000474256 STRIP2Q9ULQ0 834 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 CTNND2Q9UQB3 1225 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 SDK1Q7Z5N4 2213 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
CDPF1-205ENST00000474256 A0A1W2PQF6 199 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 SLC12A8A0AV02 714 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
CDPF1-205ENST00000474256 TM4SF5O14894 197 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 GNA14O95837 355 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 HMBSP08397 361 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 HOXB2P14652 356 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 ADIGQ0VDE8 80 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
CDPF1-205ENST00000474256 TCEAL6Q6IPX3 200 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 FAM217AQ8IXS0 508 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 FRMD1Q8N878 549 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 SLC35F5Q8WV83 523 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 KAT5Q92993 513 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 BHMTQ93088 406 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 TCEAL3Q969E4 200 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
CDPF1-205ENST00000474256 ACOX2Q99424 681 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 GABRG3Q99928 467 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 OLA1Q9NTK5 396 aaKnown RBP16.54■□□□□ 0.24
CDPF1-205ENST00000474256 SLC27A6Q9Y2P4 619 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 PCDHB4Q9Y5E5 795 aa16.54■□□□□ 0.24
CDPF1-205ENST00000474256 YJEFN3A6XGL0 299 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 E7ENQ6 273 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 GABRG2P18507 467 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 STX17P56962 302 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 GCNT1Q02742 428 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 KCNH2Q12809 1159 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 PAK1Q13153 545 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 BYSLQ13895 437 aaKnown RBP16.53■□□□□ 0.24
CDPF1-205ENST00000474256 CNGA2Q16280 664 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 STPG1Q5TH74 334 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 DENND1CQ8IV53 801 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 CHPFQ8IZ52 775 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 CPXM2Q8N436 756 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 EHBP1Q8NDI1 1231 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
CDPF1-205ENST00000474256 PLD4Q96BZ4 506 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 SPACA7Q96KW9 195 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 CNGB3Q9NQW8 809 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 MBD1Q9UIS9 605 aaPredicted RBP16.53■□□□□ 0.24
CDPF1-205ENST00000474256 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDPF1-205ENST00000474256 MYH10P35580 1976 aa16.53■□□□□ 0.24
CDPF1-205ENST00000474256 GFRA2O00451 464 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 GABBR2O75899 941 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 WASP42768 502 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 ZNF132P52740 706 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 MFAP3P55082 362 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 DAOAP59103 153 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 STILQ15468 1287 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 PPM1JQ5JR12 505 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 IL31Q6EBC2 164 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 SDE2Q6IQ49 451 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 PMF1Q6P1K2 205 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 RRAGAQ7L523 313 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 LPCAT2Q7L5N7 544 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 SIX6OS1Q8N1H7 587 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 PGBD3Q8N328 593 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 SRRTQ9BXP5 876 aaKnown RBP16.52■□□□□ 0.24
CDPF1-205ENST00000474256 ABCC13Q9NSE7 274 aa16.52■□□□□ 0.24
CDPF1-205ENST00000474256 HBS1LQ9Y450 684 aaKnown RBP16.52■□□□□ 0.24
CDPF1-205ENST00000474256 SPAG17Q6Q759 2223 aa16.51■□□□□ 0.23
CDPF1-205ENST00000474256 MAP3K13O43283 966 aa16.51■□□□□ 0.23
CDPF1-205ENST00000474256 AFPP02771 609 aaKnown RBP16.51■□□□□ 0.23
CDPF1-205ENST00000474256 LCP1P13796 627 aa16.51■□□□□ 0.23
CDPF1-205ENST00000474256 DHPSP49366 369 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms