RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FUT11Q495W5 492 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 SDE2Q6IQ49 451 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 KIAA1324Q6UXG2 1013 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 DBX2Q6ZNG2 339 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 PAQR9Q6ZVX9 377 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 TRAPPC11Q7Z392 1133 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 WDR49Q8IV35 697 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 CADM4Q8NFZ8 388 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 OR6B3Q8NGW1 331 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 C1orf216Q8TAB5 229 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 SETD7Q8WTS6 366 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 SCFD1Q8WVM8 642 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 P2RY11Q96G91 374 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 TOE1Q96GM8 510 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 KCNK16Q96T55 309 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 GPR174Q9BXC1 333 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 BBS2Q9BXC9 721 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 MKRN2Q9H000 416 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 SNX25Q9H3E2 840 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 GAREM1Q9H706 876 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 TM7SF3Q9NS93 570 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 WSB2Q9NYS7 404 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 MARK1Q9P0L2 795 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 GMIPQ9P107 970 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 CHORDC1Q9UHD1 332 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 PCDHGB2Q9Y5G2 931 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 UBR5O95071 2799 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TRABD2BA6NFA1 517 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 MEI4A8MW99 385 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 A8MXQ7 604 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 WASH3PC4AMC7 463 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 BCAT2O15382 392 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FLRT2O43155 660 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 C1QL1O75973 258 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 STAU1O95793 577 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TBX18O95935 607 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 CST3P01034 146 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 IGLV3-19P01714 112 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 PRB1P04280 392 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 CISD3P0C7P0 127 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 DLATP10515 647 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 IDEP14735 1019 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 GJB2P29033 226 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 HOXD13P35453 343 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 MATKP42679 507 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 DGKGP49619 791 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TPMTP51580 245 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TNNC1P63316 161 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 CYP4F3Q08477 520 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 STARD3Q14849 445 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SURF1Q15526 300 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SMAD1Q15797 465 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SNRNP35Q16560 246 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 PTPRNQ16849 979 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 HLA-BQ31612 363 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 WDR72Q3MJ13 1102 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 DCAF12L1Q5VU92 463 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 RRAGBQ5VZM2 374 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 IL27RAQ6UWB1 636 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 LIAT1Q6ZQX7 453 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 HTR3DQ70Z44 454 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SV2BQ7L1I2 683 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 BRAPQ7Z569 592 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FAM35AQ86V20 835 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FUKQ8N0W3 1084 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 GALNT15Q8N3T1 639 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 BHMTQ93088 406 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SMARCD1Q96GM5 515 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 TMX3Q96JJ7 454 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 XPO6Q96QU8 1125 aaKnown RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SPSB2Q99619 263 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 CDC6Q99741 560 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 GZF1Q9H116 711 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 XYLT2Q9H1B5 865 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 MIR1-1HGQ9H1L0 117 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SMYD3Q9H7B4 428 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 DMAP1Q9NPF5 467 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 KRT82Q9NSB4 513 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 PANK4Q9NVE7 773 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 COMMD8Q9NX08 183 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 WDR35Q9P2L0 1181 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FBXO2Q9UK22 296 aaPredicted RBP5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FBXO10Q9UK96 956 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 BTBD3Q9Y2F9 522 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 RAI2Q9Y5P3 530 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 SLCO1B1Q9Y6L6 691 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 STON1Q9Y6Q2 735 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 RELNP78509 3460 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 FLNCQ14315 2725 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 ATP8B3O60423 1300 aa5.42□□□□□ -1.54
SNRNP40-204ENST00000474025 NUMA1Q14980 2115 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 A0A087X0B3 334 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 A0A1B0GVT2 93 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 FAM149AA5PLN7 773 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 METTL12A8MUP2 240 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 E9PAM4 449 aa5.41□□□□□ -1.54
SNRNP40-204ENST00000474025 J3QKU1 62 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms