RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 ELK3P41970 407 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 LHX1P48742 406 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 GPX6P59796 221 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 YWHAGP61981 247 aaKnown RBP eCLIP5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 MPP2Q14168 576 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 SLC25A52Q3SY17 297 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 KCNT2Q6UVM3 1135 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 VSTM1Q6UX27 236 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 GPRIN1Q7Z2K8 1008 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 CCNYQ8ND76 341 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 FBF1Q8TES7 1133 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 ATXN2LQ8WWM7 1075 aaKnown RBP5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 SEC16BQ96JE7 1060 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 CABS1Q96KC9 395 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 CSPG4P5Q96PW8 444 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 TSPAN18Q96SJ8 248 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 SMOQ99835 787 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 ZNF670Q9BS34 389 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 CEP41Q9BYV8 373 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 ETNK1Q9HBU6 452 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 SEPT10Q9P0V9 454 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 GIT1Q9Y2X7 761 aa5.05□□□□□ -1.6
TM4SF1-202ENST00000472441 A0A1W2PPM1 405 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 NDC80O14777 642 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 GCAP28676 217 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 NOS2P35228 1153 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PHBP35232 272 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RNASELQ05823 741 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 MGAT3Q09327 533 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 AP1B1Q10567 949 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 LPIN1Q14693 890 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 SMAD1Q15797 465 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 DPYSL2Q16555 572 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 UPP1Q16831 310 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 GKAP1Q5VSY0 366 aaPredicted RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 SLC9A4Q6AI14 798 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 LIMS2Q7Z4I7 341 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 FAM35AQ86V20 835 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 METTL23Q86XA0 190 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RELL1Q8IUW5 271 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 IGDCC3Q8IVU1 814 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 OTUD6BQ8N6M0 293 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ATP11CQ8NB49 1132 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PCSK9Q8NBP7 692 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TTC16Q8NEE8 873 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CD99L2Q8TCZ2 262 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CENPIQ92674 756 aaPredicted RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CENPTQ96BT3 561 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TMEM209Q96SK2 561 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 LGMNQ99538 433 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 NCAPGQ9BPX3 1015 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TRPV6Q9H1D0 765 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 UPF3AQ9H1J1 476 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 POPDC2Q9HBU9 364 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 UBN1Q9NPG3 1134 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TMEM30AQ9NV96 361 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 MTMR10Q9NXD2 777 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 NKIRAS1Q9NYS0 192 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PAK5Q9P286 719 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 STAP1Q9ULZ2 295 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PDCD11Q14690 1871 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CLUHO75153 1309 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CELSR3Q9NYQ7 3312 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 SDK1Q7Z5N4 2213 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 A0A0U1RQF3 1178 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TCP11X1B4DZS4 312 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 GOLGA8RI6L899 631 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 METTL18O95568 372 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ALDH1A1P00352 501 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ITGB1P05556 798 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ABHD2P08910 425 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 DRD4P21917 467 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 LIG3P49916 1009 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 GEMIN4P57678 1058 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 ZKSCAN8Q15776 578 aaPredicted RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 BSPRYQ5W0U4 402 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 NUGGCQ68CJ6 796 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 HEATR6Q6AI08 1181 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 MICALCLQ6ZW33 695 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 STRADAQ7RTN6 431 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RNF180Q86T96 592 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TADA2BQ86TJ2 420 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CACNA2D3Q8IZS8 1091 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TMEM86AQ8N2M4 240 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RAET1EQ8TD07 263 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RNF34Q969K3 372 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 KLF6Q99612 283 aaPredicted RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 C11orf84Q9BUA3 381 aaPredicted RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 KLC2Q9H0B6 622 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 TRABDQ9H4I3 376 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 CYLDQ9NQC7 956 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PIGVQ9NUD9 493 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 PIH1D1Q9NWS0 290 aaKnown RBP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 DTLQ9NZJ0 730 aa5.04□□□□□ -1.6
TM4SF1-202ENST00000472441 RABGEF1Q9UJ41 708 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms