RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ZNF804A	Q7Z570	1209 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	GGN	Q86UU5	652 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	LDLRAD3	Q86YD5	345 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	ANKRD18A	Q8IVF6	992 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	OR4N4	Q8N0Y3	316 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	LINC01465	Q8N7H1	131 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	SPPL3	Q8TCT6	385 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	BBC3	Q96PG8	261 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	ITM2C	Q9NQX7	267 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	SNX15	Q9NRS6	342 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	CCNL1	Q9UK58	526 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	ASAP1	Q9ULH1	1129 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	DAPP1	Q9UN19	280 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	CNTN6	Q9UQ52	1028 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	HS3ST3A1	Q9Y663	406 aa		4.41	□□□□□ -1.7
PTCD3-209	ENST00000472044	QSOX1	O00391	747 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	ZNF213	O14771	459 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	RPP40	O75818	363 aa	Known RBP	4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	LARGE1	O95461	756 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	CER1	O95813	267 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	EBLN1	P0CF75	366 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	DRD1	P21728	446 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	DRD4	P21917	467 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	PROZ	P22891	400 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	CACNA2D1	P54289	1103 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	ZXDA	P98168	799 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	LMAN2	Q12907	356 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	BIRC3	Q13489	604 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	RNASE12	Q5GAN4	147 aa	Known RBP	4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	PCSK4	Q6UW60	755 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	MOGAT3	Q86VF5	341 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	C12orf76	Q8N812	135 aa	Predicted RBP	4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	OR6Y1	Q8NGX8	325 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	SLC22A17	Q8WUG5	538 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	THAP4	Q8WY91	577 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	FAM167B	Q9BTA0	163 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	TWSG1	Q9GZX9	223 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	VPS16	Q9H269	839 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	VPS45	Q9NRW7	570 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	SEMA5B	Q9P283	1151 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	KIF17	Q9P2E2	1029 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	SLC17A6	Q9P2U8	582 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044	PGAP2	Q9UHJ9	254 aa		4.4	□□□□□ -1.71
PTCD3-209	ENST00000472044		A0A087X1B8	175 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	MGST3	O14880	152 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	SUV39H1	O43463	412 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	MBP	P02686	304 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	ZNF37A	P17032	561 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	AKT1	P31749	480 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CXCR5	P32302	372 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	ADD2	P35612	726 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	TXNL4A	P83876	142 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CFHR3	Q02985	330 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	DPT	Q07507	201 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	FAM187B	Q17R55	369 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	TIGD6	Q17RP2	521 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	ERCC6L	Q2NKX8	1250 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	BTBD16	Q32M84	506 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	PCID2	Q5JVF3	399 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	FBXO47	Q5MNV8	452 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	L1TD1	Q5T7N2	865 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	ACSM6	Q6P461	480 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CYP26C1	Q6V0L0	522 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	MRGPRG	Q86SM5	289 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	P3H2	Q8IVL5	708 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	SUGP1	Q8IWZ8	645 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CAGE1	Q8TC20	777 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	GLMP	Q8WWB7	406 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	EDC3	Q96F86	508 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	KAZALD1	Q96I82	304 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	SNX18	Q96RF0	628 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	EIF3C	Q99613	913 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CINP	Q9BW66	212 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	ZBTB1	Q9Y2K1	713 aa		4.39	□□□□□ -1.71
PTCD3-209	ENST00000472044	CCDC187	A0A096LP49	1063 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	CCDC189	A1A4V9	331 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044		H0Y3Z8	333 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044		H3BNC9	293 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044		H7C1Q1	480 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044		M0QZQ0	153 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	CYR61	O00622	381 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	CA12	O43570	354 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	RAMP2	O60895	175 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	MATN1	P21941	496 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	YY1	P25490	414 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	DUSP1	P28562	367 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	IGHMBP2	P38935	993 aa	Known RBP	4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	GDF5	P43026	501 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	MCM2	P49736	904 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	INHBC	P55103	352 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	GPC5	P78333	572 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	CCDC15	Q0P6D6	951 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	BFSP2	Q13515	415 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	TAF5	Q15542	800 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	TBRG1	Q3YBR2	411 aa		4.38	□□□□□ -1.71
PTCD3-209	ENST00000472044	FAM153C	Q494X1	144 aa		4.38	□□□□□ -1.71

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