RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SPATA17Q96L03 361 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 CCDC114Q96M63 670 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 RNF157Q96PX1 679 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 HINFPQ9BQA5 517 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DPH5Q9H2P9 285 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SMOC2Q9H3U7 446 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DHX35Q9H5Z1 703 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 FAM204AQ9H8W3 233 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 PRDM16Q9HAZ2 1276 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 WDR6Q9NNW5 1121 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 AAASQ9NRG9 546 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DDIT4Q9NX09 232 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 MTMR10Q9NXD2 777 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 IL37Q9NZH6 218 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DRG1Q9Y295 367 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 NEU2Q9Y3R4 380 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 WDR27A2RRH5 827 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 MAP2K7O14733 419 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 IRAK2O43187 625 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 GJB5O95377 273 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PECAM1P16284 738 aaPredicted RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 CXCR3P49682 368 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 GPR15P49685 360 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 RGS19P49795 217 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 CREMQ03060 361 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 MMRN1Q13201 1228 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 HLTFQ14527 1009 aaKnown RBP eCLIP9.75□□□□□ -0.85
VPS52-216ENST00000471309 CASP8Q14790 479 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 NOMO1Q15155 1222 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 TRADDQ15628 312 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 DDR2Q16832 855 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 ARL13BQ3SXY8 428 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PPP6R3Q5H9R7 873 aaPredicted RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 BTBD8Q5XKL5 378 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 TPGS2Q68CL5 300 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 MSANTD2Q6P1R3 559 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 DENND5BQ6ZUT9 1274 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 ZNF365Q70YC5 407 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 SCD5Q86SK9 330 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 MON1AQ86VX9 555 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 DDX42Q86XP3 938 aaKnown RBP eCLIP9.75□□□□□ -0.85
VPS52-216ENST00000471309 MREGQ8N565 214 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 ALLCQ8N6M5 410 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 TTC9BQ8N6N2 239 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PQLC3Q8N755 202 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PLD5Q8N7P1 536 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 CCDC89Q8N998 374 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PCDH19Q8TAB3 1148 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 EDEM1Q92611 657 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 BADQ92934 168 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 HAUS1Q96CS2 278 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 CSPG4P5Q96PW8 444 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 SEPT5Q99719 369 aaPredicted RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 FAM118BQ9BPY3 351 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 MAK16Q9BXY0 300 aaKnown RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 CRISPLD1Q9H336 500 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 VIPAS39Q9H9C1 493 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 ZDHHC18Q9NUE0 388 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 GRHL1Q9NZI5 618 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 AFF4Q9UHB7 1163 aaKnown RBP9.75□□□□□ -0.85
VPS52-216ENST00000471309 DNPEPQ9ULA0 475 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 GREB1Q4ZG55 1949 aa9.75□□□□□ -0.85
VPS52-216ENST00000471309 PDE4DIPQ5VU43 2346 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 SYNJ2BP-COX16A0A087WUM0 186 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 H3BRJ5 948 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 MCF2LO15068 1137 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ADAM12O43184 909 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 SASH3O75995 380 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ABLIM3O94929 683 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 URODP06132 367 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ATF2P15336 505 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ZFXP17010 805 aaPredicted RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 ATF6P18850 670 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 KLRC2P26717 231 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 YWHAQP27348 245 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 OR1D2P34982 312 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ADRA1BP35368 520 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ARL4AP40617 200 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 RPL21P46778 160 aaKnown RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 TUFMP49411 452 aaKnown RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 PSEN1P49768 467 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ZNF135P52742 658 aaPredicted RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 USP46P62068 366 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 IFRD2Q12894 506 aaPredicted RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 DUSP4Q13115 394 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 SEMA3BQ13214 749 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 EIF4EBP2Q13542 120 aaPredicted RBP9.74□□□□□ -0.85
VPS52-216ENST00000471309 MGAT5BQ3V5L5 792 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 BRMS1LQ5PSV4 323 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 SDHAF4Q5VUM1 108 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ZDHHC24Q6UX98 284 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 FIBCD1Q8N539 461 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 BBOF1Q8ND07 529 aa9.74□□□□□ -0.85
VPS52-216ENST00000471309 ADAM32Q8TC27 787 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms