RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KLF8O95600 359 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 ADCY5O95622 1261 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 TYRP14679 529 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 CD19P15391 556 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 LIMK1P53667 647 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 YWHAGP61981 247 aaKnown RBP eCLIP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 GCNT1Q02742 428 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 KDSRQ06136 332 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 TYRO3Q06418 890 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 PDE4CQ08493 712 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 LRMPQ12912 555 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 BYSLQ13895 437 aaKnown RBP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 GOLGA7BQ2TAP0 167 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 PKDCCQ504Y2 493 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 PLA2G2CQ5R387 149 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 GRAMD4Q6IC98 578 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 SASS6Q6UVJ0 657 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 LCLAT1Q6UWP7 414 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 RSRC2Q7L4I2 434 aaKnown RBP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 MIB1Q86YT6 1006 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 MDGA1Q8NFP4 955 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 OLIG1Q8TAK6 271 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 ARRDC1-AS1Q9H2J1 176 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 DNAJC17Q9NVM6 304 aaKnown RBP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 FBXO10Q9UK96 956 aa14.15□□□□□ -0.14
HMGN1-211ENST00000471260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
HMGN1-211ENST00000471260 MYO18AQ92614 2054 aaKnown RBP14.14□□□□□ -0.15
HMGN1-211ENST00000471260 EML5Q05BV3 1969 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 SDK1Q7Z5N4 2213 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 DMXL1Q9Y485 3027 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 SGK1O00141 431 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 SLC30A4O14863 429 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 MDM4O15151 490 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 EFEMP1Q12805 493 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 KCNH2Q12809 1159 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 E2F5Q15329 346 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 CNGA2Q16280 664 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 C10orf76Q5T2E6 689 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 EMC10Q5UCC4 262 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 ANO7Q6IWH7 933 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 TMEM270Q6UE05 265 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 TPGS1Q6ZTW0 290 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 SFTPA1Q8IWL2 248 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 PPM1KQ8N3J5 372 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 C12orf50Q8NA57 414 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-211ENST00000471260 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 DDX1Q92499 740 aaKnown RBP14.14□□□□□ -0.15
HMGN1-211ENST00000471260 PLD4Q96BZ4 506 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 ULBP1Q9BZM6 244 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 CNGB3Q9NQW8 809 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 SPTLC3Q9NUV7 552 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 MARCH2Q9P0N8 246 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 KIAA1468Q9P260 1216 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 RASAL2Q9UJF2 1139 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 CTNND2Q9UQB3 1225 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
HMGN1-211ENST00000471260 WDR87Q6ZQQ6 2873 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-211ENST00000471260 GFRA2O00451 464 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 BIN1O00499 593 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 NPC1O15118 1278 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 ADAM23O75077 832 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 PENKP01210 267 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-211ENST00000471260 NTSR1P30989 418 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 GBP1P32455 592 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 DGKGP49619 791 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SPDYCQ5MJ68 293 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 PMS2CLQ68D20 193 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SMYD5Q6GMV2 418 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SDE2Q6IQ49 451 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SIX6OS1Q8N1H7 587 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 CPXM2Q8N436 756 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 RNF139Q8WU17 664 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SPACA7Q96KW9 195 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 FAM81BQ96LP2 452 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SRRTQ9BXP5 876 aaKnown RBP14.13□□□□□ -0.15
HMGN1-211ENST00000471260 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 ABCC13Q9NSE7 274 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 SLC27A6Q9Y2P4 619 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 HBS1LQ9Y450 684 aaKnown RBP14.13□□□□□ -0.15
HMGN1-211ENST00000471260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.13□□□□□ -0.15
HMGN1-211ENST00000471260 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
HMGN1-211ENST00000471260 BCLAF3A2AJT9 711 aaKnown RBP14.12□□□□□ -0.15
HMGN1-211ENST00000471260 ANTXRLA6NF34 631 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 TULP2O00295 520 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 DYNC1I1O14576 645 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-211ENST00000471260 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
HMGN1-211ENST00000471260 KLKB1P03952 638 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 CYBBP04839 570 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 CISD3P0C7P0 127 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 CDC25BP30305 580 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 CORO1AP31146 461 aaKnown RBP14.12□□□□□ -0.15
HMGN1-211ENST00000471260 MPLP40238 635 aa14.12□□□□□ -0.15
HMGN1-211ENST00000471260 P2RY2P41231 377 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms