RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ITGA2BP08514 1039 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 ATICP31939 592 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 RGS19P49795 217 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 RNASE9P60153 205 aaKnown RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 HSD11B2P80365 405 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 MC2RQ01718 297 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 MYO1EQ12965 1108 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 HLXQ14774 488 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 SFRP4Q6FHJ7 346 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 JMJD6Q6NYC1 403 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 TMEM108Q6UXF1 575 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 CYP26C1Q6V0L0 522 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 Q6ZRM9 215 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 MMS22LQ6ZRQ5 1243 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 LRRC55Q6ZSA7 311 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 Q6ZSN1 163 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 MAPKAPK5Q8IW41 473 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF808Q8N4W9 903 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 TTC9BQ8N6N2 239 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 PRPF18Q99633 342 aaKnown RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 TRIM5Q9C035 493 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 ZCWPW1Q9H0M4 648 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 SMOC2Q9H3U7 446 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 AS3MTQ9HBK9 375 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 EIF2B4Q9UI10 523 aaKnown RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 HERC5Q9UII4 1024 aaKnown RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-204ENST00000471245 PASKQ96RG2 1323 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 PRAMEF33A0A0G2JMD5 474 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 CCDC78A2IDD5 438 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 GRXCR1A8MXD5 290 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 IPO5O00410 1097 aaKnown RBP6.47□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF185O15231 689 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 NCAM2O15394 837 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 PRAMEF10O60809 474 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 RASAL1O95294 804 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 HLA-DOAP06340 250 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 HSPA8P11142 646 aaKnown RBP6.47□□□□□ -1.37
CKS1B-204ENST00000471245 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-204ENST00000471245 TM4SF1P30408 202 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 PDCD4Q53EL6 469 aaKnown RBP6.47□□□□□ -1.37
CKS1B-204ENST00000471245 MANEALQ5VSG8 457 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 KCTD20Q7Z5Y7 419 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 TEX19Q8NA77 164 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 EDAQ92838 391 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 ZDHHC12Q96GR4 267 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 ZSWIM1Q9BR11 485 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 CXorf36Q9H7Y0 433 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 ITM2CQ9NQX7 267 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 HELLSQ9NRZ9 838 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 TMOD4Q9NZQ9 345 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 HPSEQ9Y251 543 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 MTO1Q9Y2Z2 717 aaKnown RBP6.47□□□□□ -1.37
CKS1B-204ENST00000471245 SLX4Q8IY92 1834 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 TRPM7Q96QT4 1865 aa6.47□□□□□ -1.37
CKS1B-204ENST00000471245 CASP8AP2Q9UKL3 1982 aa6.46□□□□□ -1.37
CKS1B-204ENST00000471245 MARCH11A6NNE9 402 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 CD3EAPO15446 510 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 SRGAP2O75044 1071 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 ERN1O75460 977 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 RECQL4O94761 1208 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 CFIP05156 583 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 ACO1P21399 889 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 MAPK9P45984 424 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 CRKLP46109 303 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 NDUFV1P49821 464 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 SCNN1GP51170 649 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 RPS7P62081 194 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 PLP2Q04941 152 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 DYRK1AQ13627 763 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 KCNAB1Q14722 419 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 LIMS2Q7Z4I7 341 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 SPARTQ8N0X7 666 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 FAM109AQ8N4B1 249 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 IL17REQ8NFR9 667 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 Q8TCH9 128 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 OTUD7AQ8TE49 926 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 RSC1A1Q92681 617 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 OSBPL9Q96SU4 736 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 SLC25A32Q9H2D1 315 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 TP63Q9H3D4 680 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 RRN3Q9NYV6 651 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 PDP2Q9P2J9 529 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 NDRG4Q9ULP0 352 aaKnown RBP6.46□□□□□ -1.38
CKS1B-204ENST00000471245 HS3ST4Q9Y661 456 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 FPGT-TNNI3KV9GXZ4 949 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 XDHP47989 1333 aa6.46□□□□□ -1.38
CKS1B-204ENST00000471245 CARMIL3Q8ND23 1372 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 LTBP1Q14766 1721 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 GAGE12BA1L429 117 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 GAGE12HA6NDE8 117 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 ERVV-2B6SEH9 535 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 PCDH17O14917 1159 aa6.45□□□□□ -1.38
CKS1B-204ENST00000471245 CCNT2O60583 730 aaKnown RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 DDNO94850 711 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-204ENST00000471245 NTSR2O95665 410 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms