RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 MAGEA1P43355 309 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 PTPN9P43378 593 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 EFEMP1Q12805 493 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
SND1-209ENST00000470723 ZNF77Q15935 545 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 DNAAF5Q86Y56 855 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 DQX1Q8TE96 717 aaKnown RBP13.18□□□□□ -0.3
SND1-209ENST00000470723 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
SND1-209ENST00000470723 SELENOOQ9BVL4 669 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 PLA2G2FQ9BZM2 168 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 SLITRK6Q9H5Y7 841 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 SPTLC3Q9NUV7 552 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
SND1-209ENST00000470723 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 PCDHA13Q9Y5I0 950 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 CPQQ9Y646 472 aa13.18□□□□□ -0.3
SND1-209ENST00000470723 HEPACAM2A8MVW5 462 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 LEFTY2O00292 366 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 DPYSL4O14531 572 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 GRAP2O75791 330 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 TRUB2O95900 331 aaKnown RBP13.17□□□□□ -0.3
SND1-209ENST00000470723 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
SND1-209ENST00000470723 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 PSMC3P17980 439 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 CXCR3P49682 368 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 ZNF143P52747 638 aaPredicted RBP13.17□□□□□ -0.3
SND1-209ENST00000470723 RPL7AP62424 266 aaKnown RBP13.17□□□□□ -0.3
SND1-209ENST00000470723 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 VITQ6UXI7 678 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 RSRC2Q7L4I2 434 aaKnown RBP13.17□□□□□ -0.3
SND1-209ENST00000470723 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 SH3RF2Q8TEC5 729 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 RXFP2Q8WXD0 754 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 SERPINB11Q96P15 392 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 ADAM33Q9BZ11 813 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 TRPV5Q9NQA5 729 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 UVRAGQ9P2Y5 699 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 STOML2Q9UJZ1 356 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 SCINQ9Y6U3 715 aa13.17□□□□□ -0.3
SND1-209ENST00000470723 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 MDM4O15151 490 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 PJA2O43164 708 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 STC2O76061 302 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 MTA2O94776 668 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 KLKB1P03952 638 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 GBP1P32455 592 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 USP4Q13107 963 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 MTA1Q13330 715 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 MTF1Q14872 753 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 ACAP1Q15027 740 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 SPA17Q15506 151 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 OTUD1Q5VV17 481 aaPredicted RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 Q6ZNB5 142 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 STRADAQ7RTN6 431 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 ADGRG2Q8IZP9 1017 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 PLD4Q96BZ4 506 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 NACA2Q9H009 215 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.33e-8■■■■□ 21.2
SND1-209ENST00000470723 CALCOCO1Q9P1Z2 691 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 STAP1Q9ULZ2 295 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 REXO2Q9Y3B8 237 aaKnown RBP13.16□□□□□ -0.3
SND1-209ENST00000470723 NUMBLQ9Y6R0 609 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 TRIOO75962 3097 aa13.16□□□□□ -0.3
SND1-209ENST00000470723 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 SLC12A8A0AV02 714 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 SLC9A3R1O14745 358 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 CHADO15335 359 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 IRAK2O43187 625 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 GJB6O95452 261 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 LATS1O95835 1130 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 SLC2A3P11169 496 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms