RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 RALGAPBQ86X10 1494 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 TMEM57Q8N5G2 664 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 CPEB3Q8NE35 698 aaKnown RBP6.12□□□□□ -1.43
RBM39-227ENST00000470563 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 HAPLN3Q96S86 360 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 ACTRT3Q9BYD9 372 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 TAF1DQ9H5J8 278 aaPredicted RBP6.12□□□□□ -1.43
RBM39-227ENST00000470563 NRDE2Q9H7Z3 1164 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 LIN7CQ9NUP9 197 aaKnown RBP6.12□□□□□ -1.43
RBM39-227ENST00000470563 DERAQ9Y315 318 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
RBM39-227ENST00000470563 BCORL1Q5H9F3 1711 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 KDM6BO15054 1643 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 TARBP1Q13395 1621 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 RAPGEF6Q8TEU7 1601 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 GAPVD1Q14C86 1478 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 UHRF1BP1Q6BDS2 1440 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ANKRD30BQ9BXX2 1392 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 MUSKO15146 869 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 HSPA5P11021 654 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 NR4A1P22736 598 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 SERPINA4P29622 427 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ELF1P32519 619 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 GEMIN4P57678 1058 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 EIF4A1P60842 406 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 DCTN1Q14203 1278 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ANKRD1Q15327 319 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 TMEM63BQ5T3F8 832 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ABHD17BQ5VST6 288 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 SYNE4Q8N205 404 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ESX1Q8N693 406 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 RP9Q8TA86 221 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 SSH3Q8TE77 659 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 SLC25A43Q8WUT9 341 aaPredicted RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 RILPL2Q969X0 211 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 MAELQ96JY0 434 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 EIF2AK1Q9BQI3 630 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 ELAC1Q9H777 363 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 KLC4Q9NSK0 619 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
RBM39-227ENST00000470563 NUDCQ9Y266 331 aa6.11□□□□□ -1.43
RBM39-227ENST00000470563 EIF2AK4Q9P2K8 1649 aaKnown RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 CEP170Q5SW79 1584 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 SHANK2Q9UPX8 1470 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 DAPK1P53355 1430 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 A1L4Q6 167 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 SLC38A8A6NNN8 435 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 B4E171 279 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 TISP43B9A030 160 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 EXOC5O00471 708 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 PPM1DO15297 605 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 MPPED1O15442 326 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 TMEM63AO94886 807 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 RHOBTB3O94955 611 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 SPDEFO95238 335 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 DDX58O95786 925 aaKnown RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 EGR2P11161 476 aaPredicted RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 BDNFP23560 247 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 NTSR1P30989 418 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 TSPAN7P41732 249 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 HNRNPMP52272 730 aaKnown RBP eCLIP6.1□□□□□ -1.43
RBM39-227ENST00000470563 SLC25A3Q00325 362 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.1□□□□□ -1.43
RBM39-227ENST00000470563 BTBD16Q32M84 506 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 CTXN3Q4LDR2 81 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 DEPDC1Q5TB30 811 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 DSTYKQ6XUX3 929 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 C1orf122Q6ZSJ8 110 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 USP51Q70EK9 711 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 FSTL5Q8N475 847 aaPredicted RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 ZNF276Q8N554 614 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 B3GALNT2Q8NCR0 500 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 SUPT20HQ8NEM7 779 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 AFG1LQ8WV93 481 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 KTI12Q96EK9 354 aaPredicted RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 WDYHV1Q96HA8 205 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 PBKQ96KB5 322 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 KLC2Q9H0B6 622 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 EPS8L2Q9H6S3 715 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 TBCCD1Q9NVR7 557 aa6.1□□□□□ -1.43
RBM39-227ENST00000470563 GAR1Q9NY12 217 aaKnown RBP6.1□□□□□ -1.43
RBM39-227ENST00000470563 BRD4O60885 1362 aaPredicted RBP6.09□□□□□ -1.43
RBM39-227ENST00000470563 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 A0A0G2JLL6 359 aaPredicted RBP6.09□□□□□ -1.43
RBM39-227ENST00000470563 PIPSLA2A3N6 862 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 E7EVH7 732 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 PSMD9O00233 223 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 NKX2-8O15522 239 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 HNRNPRO43390 633 aaKnown RBP6.09□□□□□ -1.43
RBM39-227ENST00000470563 CER1O95813 267 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 CYP3A4P08684 503 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 DLDP09622 509 aaKnown RBP6.09□□□□□ -1.43
RBM39-227ENST00000470563 TMEM225BP0DP42 221 aa6.09□□□□□ -1.43
RBM39-227ENST00000470563 GKP32189 559 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms