RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CLIC6Q96NY7 704 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 KIF2CQ99661 725 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 C6orf106Q9H6K1 298 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 TLR8Q9NR97 1041 aaKnown RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CLIC4Q9Y696 253 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 AK5Q9Y6K8 562 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 APC2O95996 2303 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CELSR3Q9NYQ7 3312 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 ATXN7O15265 892 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 CYP26A1O43174 497 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 TNFSF14O43557 240 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 GREM1O60565 184 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 EPHX1P07099 455 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 PRKCHP24723 683 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ADORA2BP29275 332 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 OXTRP30559 389 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ATP5C1P36542 298 aaKnown RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 STAT6P42226 847 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 CEBPZQ03701 1054 aaKnown RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ALCAMQ13740 583 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ZNF234Q14588 700 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 GEN1Q17RS7 908 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 C10orf120Q5SQS8 335 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 SNX30Q5VWJ9 437 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ADAT2Q7Z6V5 191 aaKnown RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 CADM4Q8NFZ8 388 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 SORCS1Q8WY21 1168 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 P2RY11Q96G91 374 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 SMARCD1Q96GM5 515 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 FCRL3Q96P31 734 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 CGRRF1Q99675 332 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 SMOQ99835 787 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 CIPCQ9C0C6 399 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 FAM49BQ9NUQ9 324 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 OSER1Q9NX31 292 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 FTSJ1Q9UET6 329 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 ANKRD6Q9Y2G4 727 aa9.62□□□□□ -0.87
CCDC171-204ENST00000470191 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
CCDC171-204ENST00000470191 A0A1W2PQH9 124 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 H0Y8X5 98 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 PYCARD-AS1I3L0S3 204 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 DKK1O94907 266 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 FSBPO95073 299 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 KIF20AO95235 890 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 BMP15O95972 392 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 ZDHHC11BP0C7U3 371 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 JUPP14923 745 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 ACSL1P33121 698 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 TXLNAP40222 546 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 GRK6P43250 576 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 CASP4P49662 377 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 TUBP50607 506 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 COPAP53621 1224 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 ARID5AQ03989 594 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 BIRC3Q13489 604 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 TEAD4Q15561 434 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 SMAD1Q15797 465 aaKnown RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 SNRNP35Q16560 246 aaKnown RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 KCNT1Q5JUK3 1230 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 PRAMEF14Q5SWL7 426 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 LARP1BQ659C4 914 aaKnown RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 GPRIN1Q7Z2K8 1008 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 GATAD2AQ86YP4 633 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 NELFCDQ8IXH7 590 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 CCDC65Q8IXS2 484 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 PDILTQ8N807 584 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 ZMIZ2Q8NF64 920 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 ARID3AQ99856 593 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 SDCBP2Q9H190 292 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 NMUR1Q9HB89 426 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 IL37Q9NZH6 218 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-204ENST00000470191 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 PCDHGB2Q9Y5G2 931 aa9.61□□□□□ -0.87
CCDC171-204ENST00000470191 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
CCDC171-204ENST00000470191 A0A087X0B3 334 aa9.6□□□□□ -0.87
CCDC171-204ENST00000470191 VPS37CA5D8V6 355 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-204ENST00000470191 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
CCDC171-204ENST00000470191 STC2O76061 302 aa9.6□□□□□ -0.87
CCDC171-204ENST00000470191 RARGP13631 454 aa9.6□□□□□ -0.87
CCDC171-204ENST00000470191 ACO1P21399 889 aaKnown RBP9.6□□□□□ -0.87
CCDC171-204ENST00000470191 HOXD13P35453 343 aa9.6□□□□□ -0.87
CCDC171-204ENST00000470191 CCT8P50990 548 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms