RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 QTRT1Q9BXR0 403 aaKnown RBP4.6□□□□□ -1.67
BRCA2-202ENST00000470094 NECTIN3Q9NQS3 549 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 PDGFCQ9NRA1 345 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 VPS45Q9NRW7 570 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 TM7SF3Q9NS93 570 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 FNIP2Q9P278 1114 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 FZD4Q9ULV1 537 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 WDR17Q8IZU2 1322 aa4.6□□□□□ -1.67
BRCA2-202ENST00000470094 CCDC194A0A1B0GVG4 234 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 CBFA2T3O75081 653 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ATF7P17544 494 aaPredicted RBP4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ABCB4P21439 1286 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 GALNSP34059 522 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 GSTM5P46439 218 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 JAK3P52333 1124 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 P3H1Q32P28 736 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 SUPT20HL1Q3ZLR7 823 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 MTX3Q5HYI7 312 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 TMTC4Q5T4D3 741 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ARL6IP4Q66PJ3 421 aaKnown RBP4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ZNF626Q68DY1 528 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 RANBP10Q6VN20 620 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 TTC30AQ86WT1 665 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 OSR1Q8TAX0 266 aaPredicted RBP4.59□□□□□ -1.67
BRCA2-202ENST00000470094 PNISRQ8TF01 805 aaKnown RBP4.59□□□□□ -1.67
BRCA2-202ENST00000470094 PRR11Q96HE9 360 aaPredicted RBP4.59□□□□□ -1.67
BRCA2-202ENST00000470094 FAM118BQ9BPY3 351 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 NUDT22Q9BRQ3 303 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ADGRE3Q9BY15 652 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 STK33Q9BYT3 514 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 SAP30LQ9HAJ7 183 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ARFGAP3Q9NP61 516 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 KLHL13Q9P2N7 655 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 CA14Q9ULX7 337 aa4.59□□□□□ -1.67
BRCA2-202ENST00000470094 ZNF804BA4D1E1 1349 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SMIM35A0A1B0GVV1 85 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 DSCR3O14972 297 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 PLA2G6O60733 806 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 MMP8P22894 467 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 ARHGAP25P42331 645 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 WDR5P61964 334 aaKnown RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 RAE1P78406 368 aaKnown RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SEMA3BQ13214 749 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SLC14A1Q13336 389 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 RAB30Q15771 203 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 PFKFB3Q16875 520 aaPredicted RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SYCP2LQ5T4T6 812 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 FAM90A2PQ658T7 463 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SYTL1Q8IYJ3 562 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 CLASRPQ8N2M8 674 aaKnown RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF398Q8TD17 642 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 OVCA2Q8WZ82 227 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 MUL1Q969V5 352 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 KAZALD1Q96I82 304 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SLC29A3Q9BZD2 475 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF700Q9H0M5 742 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 CHST12Q9NRB3 414 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 HELLSQ9NRZ9 838 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SLC39A10Q9ULF5 831 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 VPS4AQ9UN37 437 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SCAF8Q9UPN6 1271 aaKnown RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 PCDHB2Q9Y5E7 798 aa4.58□□□□□ -1.68
BRCA2-202ENST00000470094 SETD1BQ9UPS6 1966 aaKnown RBP4.58□□□□□ -1.68
BRCA2-202ENST00000470094 WDR91A4D1P6 747 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 KCNU1A8MYU2 1149 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 GLP2RO95838 553 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 SLC3A2P08195 630 aaKnown RBP4.57□□□□□ -1.68
BRCA2-202ENST00000470094 MATN1P21941 496 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 IGHMBP2P38935 993 aaKnown RBP4.57□□□□□ -1.68
BRCA2-202ENST00000470094 TECP42680 631 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 STARD3Q14849 445 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 CNGA3Q16281 694 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 MORN5Q5VZ52 161 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 CCDC144NLQ6NUI1 221 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 XRRA1Q6P2D8 792 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 SLC2A7Q6PXP3 512 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 TMEM8AQ9HCN3 771 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 ABHD10Q9NUJ1 306 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 ARL8BQ9NVJ2 186 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 SLC52A1Q9NWF4 448 aa4.57□□□□□ -1.68
BRCA2-202ENST00000470094 SPATA31A1Q5TZJ5 1347 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 CYP2D7A0A087X1C5 515 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 PNMA6EA0A0J9YXQ4 647 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 TTC34A8MYJ7 566 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 J3KTA2 159 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 MBPP02686 304 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 DUSP1P28562 367 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 TACR3P29371 465 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 PPM1AP35813 382 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 GHRHRQ02643 423 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 CSHL1Q14406 222 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 KPNB1Q14974 876 aaKnown RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 DAZAP2Q15038 168 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 BRD3Q15059 726 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 MEX3CQ5U5Q3 659 aaKnown RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 ANO7Q6IWH7 933 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 KRT27Q7Z3Y8 459 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 IPO4Q8TEX9 1081 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms