RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 KRT39Q6A163 491 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 TMCO3Q6UWJ1 677 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 NUP93Q8N1F7 819 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 LMO3Q8TAP4 145 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
MRPL28-208ENST00000469744 RNF38Q9H0F5 515 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 PRMT8Q9NR22 394 aaPredicted RBP18.51■□□□□ 0.55
MRPL28-208ENST00000469744 SMPD4Q9NXE4 827 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 EHD2Q9NZN4 543 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 ADAMTS1Q9UHI8 967 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 FBXO4Q9UKT5 387 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 CAPN6Q9Y6Q1 641 aa18.51■□□□□ 0.55
MRPL28-208ENST00000469744 GPR179Q6PRD1 2367 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 CCDC151A5D8V7 595 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 F8VZ95 297 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 ENC1O14682 589 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 SCAMP3O14828 347 aaKnown RBP18.5■□□□□ 0.55
MRPL28-208ENST00000469744 YWHAQP27348 245 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 GTF2H1P32780 548 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 SLC5A3P53794 718 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 INCA1Q0VD86 236 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 UNC93AQ86WB7 457 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 CRYBG2Q8N1P7 616 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 ZMIZ2Q8NF64 920 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 HNRNPLLQ8WVV9 542 aaKnown RBP18.5■□□□□ 0.55
MRPL28-208ENST00000469744 FBXO32Q969P5 355 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 SLITRK1Q96PX8 696 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 SMOQ99835 787 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 PARD6BQ9BYG5 372 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 DUS2Q9NX74 493 aaKnown RBP18.5■□□□□ 0.55
MRPL28-208ENST00000469744 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 NAGPAQ9UK23 515 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 AJAP1Q9UKB5 411 aaPredicted RBP18.5■□□□□ 0.55
MRPL28-208ENST00000469744 ARHGAP26Q9UNA1 814 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 HYOU1Q9Y4L1 999 aa18.5■□□□□ 0.55
MRPL28-208ENST00000469744 A0A0A6YYK5 440 aaPredicted RBP18.49■□□□□ 0.55
MRPL28-208ENST00000469744 TNFRSF10BO14763 440 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 ZRANB2O95218 330 aaKnown RBP eCLIP18.49■□□□□ 0.55
MRPL28-208ENST00000469744 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 SATB1Q01826 763 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 ARID5AQ03989 594 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 LRRC32Q14392 662 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 DRAP1Q14919 205 aaPredicted RBP18.49■□□□□ 0.55
MRPL28-208ENST00000469744 PDGFRLQ15198 375 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 ZNF394Q53GI3 561 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 C1orf228Q6PIY5 440 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 ZC3H14Q6PJT7 736 aaKnown RBP18.49■□□□□ 0.55
MRPL28-208ENST00000469744 WHAMMQ8TF30 809 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 OSCP1Q8WVF1 389 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 ARID3AQ99856 593 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 LINC00597Q9H2U6 94 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 CYP3A43Q9HB55 503 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 CHORDC1Q9UHD1 332 aaPredicted RBP18.49■□□□□ 0.55
MRPL28-208ENST00000469744 CPQQ9Y646 472 aa18.49■□□□□ 0.55
MRPL28-208ENST00000469744 SPTBN4Q9H254 2564 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 LEFTY2O00292 366 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 CILPO75339 1184 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 RTN3O95197 1032 aaPredicted RBP18.48■□□□□ 0.55
MRPL28-208ENST00000469744 OAS1P00973 400 aaKnown RBP18.48■□□□□ 0.55
MRPL28-208ENST00000469744 MCM3P25205 808 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 IFNAR2P48551 515 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 CCINQ13939 588 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 ZNF528Q3MIS6 628 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 FBXL13Q8NEE6 735 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 NT5C1AQ9BXI3 368 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 ANKZF1Q9H8Y5 726 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 C2orf42Q9NWW7 574 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 RAB20Q9NX57 234 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 GMIPQ9P107 970 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 OTOGLQ3ZCN5 2332 aa18.48■□□□□ 0.55
MRPL28-208ENST00000469744 LMNAP02545 664 aaKnown RBP18.47■□□□□ 0.55
MRPL28-208ENST00000469744 HOXC13P31276 330 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 PPP3CCP48454 512 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 PDE6CP51160 858 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 EML3Q32P44 896 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 FSTL4Q6MZW2 842 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 ALKBH5Q6P6C2 394 aaKnown RBP18.47■□□□□ 0.55
MRPL28-208ENST00000469744 GPRIN1Q7Z2K8 1008 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 CPA6Q8N4T0 437 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 SLC30A5Q8TAD4 765 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 TATDN2Q93075 761 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 CYFIP2Q96F07 1278 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 SYT11Q9BT88 431 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 ECT2Q9H8V3 914 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 FBRSL1Q9HCM7 1045 aaKnown RBP18.47■□□□□ 0.55
MRPL28-208ENST00000469744 ZNF446Q9NWS9 450 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 SALL4Q9UJQ4 1053 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 COQ4Q9Y3A0 265 aa18.47■□□□□ 0.55
MRPL28-208ENST00000469744 TARSL2A2RTX5 802 aaKnown RBP18.46■□□□□ 0.55
MRPL28-208ENST00000469744 OLFM2O95897 454 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 FAM200BP0CF97 657 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 MBL2P11226 248 aaPredicted RBP18.46■□□□□ 0.55
MRPL28-208ENST00000469744 TDGF1P13385 188 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 GJA4P35212 333 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 PGFP49763 221 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 CCR3P51677 355 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 SLC7A9P82251 487 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 DGKKQ5KSL6 1271 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 GJB7Q6PEY0 223 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms