RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CELF3Q5SZQ8 465 aaKnown RBP6.94□□□□□ -1.3
PTCD3-208ENST00000469585 LILRA6Q6PI73 481 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 METTL7BQ6UX53 244 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 SLC39A5Q6ZMH5 540 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 USP45Q70EL2 814 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 NIPA1Q7RTP0 329 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 PLA2G4DQ86XP0 818 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 CCDC83Q8IWF9 413 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 TRPV1Q8NER1 839 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 LRRC37BQ96QE4 947 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 SENP7Q9BQF6 1050 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ZNF577Q9BSK1 485 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 RAB34Q9BZG1 259 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 UPF3AQ9H1J1 476 aaKnown RBP6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ADAM7Q9H2U9 754 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 IL23AQ9NPF7 189 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ANLNQ9NQW6 1124 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 PPP4R1LQ9P1A2 415 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 BAZ2BQ9UIF8 2168 aaKnown RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 ADCY6O43306 1168 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 PRICKLE3O43900 615 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 CDC14BO60729 498 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 PLATP00750 562 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 CASRP41180 1078 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 FXR1P51114 621 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 BEX3Q00994 111 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 DUSP2Q05923 314 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 BFSP2Q13515 415 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 IL10RAQ13651 578 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 BECN1Q14457 450 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 MLC1Q15049 377 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 ME3Q16798 604 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 TMEM266Q2M3C6 531 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 PRR16Q569H4 304 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 TAPT1Q6NXT6 567 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 MIS18BP1Q6P0N0 1132 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 NFRKBQ6P4R8 1299 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 B3GNT9Q6UX72 402 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 CXCL17Q6UXB2 119 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 SPOCD1Q6ZMY3 1216 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 TMEM199Q8N511 208 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 NECAB1Q8N987 351 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 OR7D4Q8NG98 312 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 DIS3LQ8TF46 1054 aaKnown RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 AFG1LQ8WV93 481 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 SEPT1Q8WYJ6 367 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 TBC1D5Q92609 795 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 HPS3Q969F9 1004 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 IL17RAQ96F46 866 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 INPP4AQ96PE3 977 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 C7orf25Q9BPX7 421 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 MXRA8Q9BRK3 442 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 C12orf65Q9H3J6 166 aaKnown RBP6.93□□□□□ -1.3
PTCD3-208ENST00000469585 SMARCAD1Q9H4L7 1026 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 PDGFCQ9NRA1 345 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 COL20A1Q9P218 1284 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 SLC9A2Q9UBY0 812 aa6.93□□□□□ -1.3
PTCD3-208ENST00000469585 UBE2QL1A1L167 161 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 IPO5O00410 1097 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 CCNT1O60563 726 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 MMP3P08254 477 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 ACTN1P12814 892 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 UBA1P22314 1058 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 SFNP31947 248 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 ICAM3P32942 547 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 SLC26A2P50443 739 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 LETM2Q2VYF4 491 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 TRIM60Q495X7 471 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 UTP14CQ5TAP6 766 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 PIK3AP1Q6ZUJ8 805 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 NEK8Q86SG6 692 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 C14orf80Q86SX3 495 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 TAX1BP1Q86VP1 789 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 WDR75Q8IWA0 830 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 SMAP1Q8IYB5 467 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 EXOC8Q8IYI6 725 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 KLHDC9Q8NEP7 349 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 ERMNQ8TAM6 284 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 TBCKQ8TEA7 893 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 FAM167AQ96KS9 214 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 SSBP3Q9BWW4 388 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 TEKT3Q9BXF9 490 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 NELFAQ9H3P2 528 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 ERAP1Q9NZ08 941 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 DDX25Q9UHL0 483 aaKnown RBP6.92□□□□□ -1.3
PTCD3-208ENST00000469585 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 FRMPD4Q14CM0 1322 aa6.92□□□□□ -1.3
PTCD3-208ENST00000469585 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 MMP1P03956 469 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 CYP3A4P08684 503 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 TMOD1P28289 359 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 TCF7P36402 384 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-208ENST00000469585 JAK3P52333 1124 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 PURAQ00577 322 aaKnown RBP6.91□□□□□ -1.3
PTCD3-208ENST00000469585 DSC2Q02487 901 aa6.91□□□□□ -1.3
PTCD3-208ENST00000469585 TLE2Q04725 743 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms