RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 GMIPQ9P107 970 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CALCOCO1Q9P1Z2 691 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 UXTQ9UBK9 157 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 STAP1Q9ULZ2 295 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 NAALADL1Q9UQQ1 740 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 HCFC2Q9Y5Z7 792 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 DENND4CQ5VZ89 1909 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 ANAPC1Q9H1A4 1944 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 MYO7AQ13402 2215 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 A0A1W2PQH9 124 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 FAM170AA1A519 330 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PRRG1O14668 218 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 MDM4O15151 490 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 GRAP2O75791 330 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 F9P00740 461 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 TCF4P15884 667 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 TFE3P19532 575 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 IL1R2P27930 398 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 MIPP30301 263 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CASQ1P31415 396 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CDR1P51861 262 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PITX1P78337 314 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 VEPH1Q14D04 833 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PTPROQ16827 1216 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 BOLA3Q53S33 107 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 DCAF12L1Q5VU92 463 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CREG2Q8IUH2 290 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 LEMD2Q8NC56 503 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 VN1R2Q8NFZ6 395 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 KRT35Q92764 455 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 FBXO32Q969P5 355 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 ZNF707Q96C28 371 aaPredicted RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PBKQ96KB5 322 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CFAP57Q96MR6 1250 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 SLITRK1Q96PX8 696 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 PEBP4Q96S96 227 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 OSBPL9Q96SU4 736 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CDK5RAP1Q96SZ6 601 aaKnown RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 ZNF576Q9H609 170 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 TLR8Q9NR97 1041 aaKnown RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 OLA1Q9NTK5 396 aaKnown RBP8.51□□□□□ -1.05
NPHP3-204ENST00000469232 RNF14Q9UBS8 474 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 CDC23Q9UJX2 597 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 EFR3BQ9Y2G0 817 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 HYOU1Q9Y4L1 999 aa8.51□□□□□ -1.05
NPHP3-204ENST00000469232 OBSL1O75147 1896 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MYO16Q9Y6X6 1858 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 NOTCH4Q99466 2003 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 C3orf70A6NLC5 250 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 ENC1O14682 589 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 IRAK2O43187 625 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MOSPD3O75425 235 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 RNF8O76064 485 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 FGF19O95750 216 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 OAS1P00973 400 aaKnown RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 EPCAMP16422 314 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 RDXP35241 583 aaKnown RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MARCKSL1P49006 195 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 NAP1L1P55209 391 aaKnown RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 NRG1Q02297 640 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 RING1Q06587 406 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 SEMA3BQ13214 749 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 CTC1Q2NKJ3 1217 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 C15orf59Q2T9L4 293 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 RAB6CQ53S08 254 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 DCAF6Q58WW2 860 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 TXNRD3NBQ6F5E7 133 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 TAC4Q86UU9 113 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 EFHBQ8N7U6 833 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 EXD1Q8NHP7 514 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 GDPD5Q8WTR4 605 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 FAM172AQ8WUF8 416 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 TSC1Q92574 1164 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 FAM149B1Q96BN6 582 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 RAB6CQ9H0N0 254 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 TTYH1Q9H313 450 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 ZNF334Q9HCZ1 680 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MAN1C1Q9NR34 630 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 PIGVQ9NUD9 493 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MTMR10Q9NXD2 777 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 ARHGEF38Q9NXL2 777 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 ZMYM5Q9UJ78 669 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 USP18Q9UMW8 372 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 HBS1LQ9Y450 684 aaKnown RBP8.5□□□□□ -1.05
NPHP3-204ENST00000469232 MRFAP1Q9Y605 127 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 SAR1BQ9Y6B6 198 aa8.5□□□□□ -1.05
NPHP3-204ENST00000469232 KCNU1A8MYU2 1149 aa8.49□□□□□ -1.05
NPHP3-204ENST00000469232 I6L893 689 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms