RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 MRPS5P82675 430 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 ATG16L1Q676U5 607 aa16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 WDR60Q8WVS4 1066 aa16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 VRTNQ9H8Y1 702 aa16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 KCNK4Q9NYG8 393 aa16.36■□□□□ 0.21
TSPAN4-211ENST00000468468 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CYB561D2O14569 222 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 PSMG1O95456 288 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 TTLL4Q14679 1199 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CHI3L2Q15782 390 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CA9Q16790 459 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 SNX30Q5VWJ9 437 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 NUDCD3Q8IVD9 361 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 C12orf29Q8N999 325 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 ZNF333Q96JL9 665 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 C7orf26Q96N11 449 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 ACAP3Q96P50 834 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 MIS12Q9H081 205 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 SMARCAD1Q9H4L7 1026 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 ZNF395Q9H8N7 513 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 MAD1L1Q9Y6D9 718 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 PDHXO00330 501 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 PFKMP08237 780 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CSH1P0DML2 217 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 CSH2P0DML3 217 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 PGM1P36871 562 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 SLC10A6Q3KNW5 377 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 TRIM56Q9BRZ2 755 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 SNRNP25Q9BV90 132 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 MMADHCQ9H3L0 296 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 PPARGC1AQ9UBK2 798 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-211ENST00000468468 B2RBV5 119 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 CAPN9O14815 690 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 HBP1O60381 514 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 KRT38O76015 456 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ENO1P06733 434 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 KITP10721 976 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 MCF2P10911 925 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ADORA2AP29274 412 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 CCNFP41002 786 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 HSF5Q4G112 596 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 PPP6R3Q5H9R7 873 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 CES4AQ5XG92 561 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 FAM91A1Q658Y4 838 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 SLC9A4Q6AI14 798 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 CFAP61Q8NHU2 1237 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 DTX3LQ8TDB6 740 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 NRG4Q8WWG1 115 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 STMN2Q93045 179 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ASB7Q9H672 318 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 KAT6AQ92794 2004 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 SLC34A1Q06495 639 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 TMEM132DQ14C87 1099 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ARHGAP24Q8N264 748 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 SMC1BQ8NDV3 1235 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 PCMTD2Q9NV79 361 aa16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 MARCOQ9UEW3 520 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-211ENST00000468468 ASB14A6NK59 587 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 BTBD19C9JJ37 291 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 LINGO3P0C6S8 592 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 SDC4P31431 198 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 MAGEA6P43360 314 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 PHKA2P46019 1235 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 OCRLQ01968 901 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 INCA1Q0VD86 236 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 MDH1BQ5I0G3 518 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 MROH9Q5TGP6 573 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 TRMT10BQ6PF06 316 aaKnown RBP16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 TREML1Q86YW5 311 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 NDUFAF2Q8N183 169 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 TEKT4Q8WW24 435 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 LRRC39Q96DD0 335 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 PDZD7Q9H5P4 517 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 SIRPGQ9P1W8 387 aa16.33■□□□□ 0.21
TSPAN4-211ENST00000468468 A0A087WZ62 844 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 DPPA5A6NC42 116 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 H3BRJ5 948 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 TBX10O75333 385 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 METTL18O95568 372 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 MRPS35P82673 323 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 THOC5Q13769 683 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 TAPT1Q6NXT6 567 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 PMF1Q6P1K2 205 aa16.33■□□□□ 0.2
TSPAN4-211ENST00000468468 RFX8Q6ZV50 586 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms