RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.42
VPS26A-204ENST00000467852 AASDHPPTQ9NRN7 309 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 THAP10Q9P2Z0 257 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-204ENST00000467852 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 GTF3C4Q9UKN8 822 aa12.4□□□□□ -0.42
VPS26A-204ENST00000467852 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.42
VPS26A-204ENST00000467852 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 A1L4Q6 167 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 SIGLEC6O43699 453 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 WNT1P04628 370 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 ANXA13P27216 316 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 MAGEA11P43364 429 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 ZNF211Q13398 564 aaPredicted RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 ENPP2Q13822 863 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 MORC3Q14149 939 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 JADE1Q6IE81 842 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 CLEC14AQ86T13 490 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 CD302Q8IX05 232 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 DUSP9Q99956 384 aaKnown RBP12.39□□□□□ -0.43
VPS26A-204ENST00000467852 OSBPL2Q9H1P3 480 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
VPS26A-204ENST00000467852 A0A1B0GTL3 188 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 MED24O75448 989 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 EPHX1P07099 455 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 CISD3P0C7P0 127 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 THEGLP0DJG4 465 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 ACAT1P24752 427 aaKnown RBP12.38□□□□□ -0.43
VPS26A-204ENST00000467852 USP46P62068 366 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 CLCA4Q14CN2 919 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 SV2CQ496J9 727 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 SLC45A4Q5BKX6 768 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
VPS26A-204ENST00000467852 MIB2Q96AX9 1013 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 SLITRK1Q96PX8 696 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 TTLL2Q9BWV7 592 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-204ENST00000467852 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-204ENST00000467852 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
VPS26A-204ENST00000467852 LRWD1Q9UFC0 647 aa12.38□□□□□ -0.43
VPS26A-204ENST00000467852 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 TNFSF15O95150 251 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 DEXIO95424 95 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 GP1BAP07359 652 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 ACO1P21399 889 aaKnown RBP12.37□□□□□ -0.43
VPS26A-204ENST00000467852 CD97P48960 835 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 TMEM132DQ14C87 1099 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 ENOX2Q16206 610 aaKnown RBP12.37□□□□□ -0.43
VPS26A-204ENST00000467852 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 ATXN7L3BQ96GX2 97 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-204ENST00000467852 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.439e-9■■■■■ 107.1
VPS26A-204ENST00000467852 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-204ENST00000467852 SVILO95425 2214 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
VPS26A-204ENST00000467852 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 A0A087X0B3 334 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 A0A1W2PNU3 283 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 TLR4O00206 839 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 TRIM38O00635 465 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 SLC16A4O15374 487 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 ADRB2P07550 413 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 HMGB1P09429 215 aaKnown RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 COL8A1P27658 744 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 TAF10Q12962 218 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 TDRD10Q5VZ19 366 aaKnown RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 Q6ZUG5 572 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 TMC6Q7Z403 805 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 BRF1Q92994 677 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 MARK1Q9P0L2 795 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
VPS26A-204ENST00000467852 KCNJ14Q9UNX9 436 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 DERAQ9Y315 318 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
VPS26A-204ENST00000467852 A0A1B0GVM2 712 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 LZTS3O60299 673 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms