RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.38
CTNS-205ENST00000467663 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 HEXIM2Q96MH2 286 aaKnown RBP12.65□□□□□ -0.38
CTNS-205ENST00000467663 TUBB2BQ9BVA1 445 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
CTNS-205ENST00000467663 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 MRPL47Q9HD33 250 aaKnown RBP12.65□□□□□ -0.38
CTNS-205ENST00000467663 ZSCAN32Q9NX65 697 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 TRPM5Q9NZQ8 1165 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 WDR35Q9P2L0 1181 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 HESX1Q9UBX0 185 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTNS-205ENST00000467663 PCDHGA2Q9Y5H1 932 aa12.65□□□□□ -0.38
CTNS-205ENST00000467663 DENND4CQ5VZ89 1909 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 OBSL1O75147 1896 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
CTNS-205ENST00000467663 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
CTNS-205ENST00000467663 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 O00370 1275 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 LILRB5O75023 590 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 CKMP06732 381 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 TNNT1P13805 278 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 HDCP19113 662 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 CCR3P51677 355 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 SLC8A3P57103 927 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 NOMO3P69849 1222 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 USP4Q13107 963 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 CCINQ13939 588 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 PPP2R5DQ14738 602 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 PON2Q15165 354 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 TRIM68Q6AZZ1 485 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
CTNS-205ENST00000467663 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 SYCE1Q8N0S2 351 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 SYNPOQ8N3V7 929 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 ARL14EPQ8N8R7 260 aaPredicted RBP12.64□□□□□ -0.39
CTNS-205ENST00000467663 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 OSCP1Q8WVF1 389 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 CHFRQ96EP1 664 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 LZTFL1Q9NQ48 299 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
CTNS-205ENST00000467663 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 USP34Q70CQ2 3546 aa12.64□□□□□ -0.39
CTNS-205ENST00000467663 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 PTPRDP23468 1912 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 TRDMT1O14717 391 aaKnown RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 MTA2O94776 668 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 PAPSS2O95340 614 aaPredicted RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 OLFM2O95897 454 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 ARSAP15289 507 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 CXCL12P48061 93 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 GSCP56915 257 aaPredicted RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 GNG11P61952 73 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 TAF10Q12962 218 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 TMEM196Q5HYL7 178 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 DNTTIP2Q5QJE6 756 aaKnown RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 ACOT1Q86TX2 421 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 MCOLN2Q8IZK6 566 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 KIAA1958Q8N8K9 716 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 ATRIPQ8WXE1 791 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 CYFIP2Q96F07 1278 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 C16orf45Q96MC5 204 aaPredicted RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
CTNS-205ENST00000467663 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 IL37Q9NZH6 218 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 SCINQ9Y6U3 715 aa12.63□□□□□ -0.39
CTNS-205ENST00000467663 GREB1Q4ZG55 1949 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 FANCMQ8IYD8 2048 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 PTPRZ1P23471 2315 aaPredicted RBP12.62□□□□□ -0.39
CTNS-205ENST00000467663 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 OAS1P00973 400 aaKnown RBP12.62□□□□□ -0.39
CTNS-205ENST00000467663 CYP1A2P05177 515 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 MMP8P22894 467 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 YWHAQP27348 245 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 ACADSBP45954 432 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 BCAT1P54687 386 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 NRLP54845 237 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 SLC7A9P82251 487 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 ZXDBP98169 803 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 AMPD2Q01433 879 aa12.62□□□□□ -0.39
CTNS-205ENST00000467663 SATB1Q01826 763 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms