RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PLA2G4BP0C869 781 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 CKMT2P17540 419 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 CACNA2D1P54289 1103 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 SLC12A3P55017 1021 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 WNT7BP56706 349 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ERVPABLB-1P60509 514 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 RACK1P63244 317 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 POU5F1Q01860 360 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ENPP2Q13822 863 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 UBAP2LQ14157 1087 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ZNF234Q14588 700 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 SHBQ15464 509 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 GEN1Q17RS7 908 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 INO80CQ6PI98 192 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 CRELD2Q6UXH1 353 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 HTR3DQ70Z44 454 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 NUP93Q8N1F7 819 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 C4orf32Q8N8J7 132 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 OR2T3Q8NH03 318 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 MYCBPAPQ8TBZ2 947 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 POMGNT1Q8WZA1 660 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 VCPIP1Q96JH7 1222 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 MMTAG2Q9BU76 263 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ELOVL4Q9GZR5 314 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 THSD1Q9NS62 852 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 KCNK4Q9NYG8 393 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 SEPT3Q9UH03 358 aa10.83□□□□□ -0.68
HDAC3-203ENST00000467533 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 NOL7Q9UMY1 257 aaKnown RBP10.83□□□□□ -0.68
HDAC3-203ENST00000467533 ENO4A6NNW6 628 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 DXOO77932 396 aaKnown RBP10.82□□□□□ -0.68
HDAC3-203ENST00000467533 AFPP02771 609 aaKnown RBP10.82□□□□□ -0.68
HDAC3-203ENST00000467533 TMEM191BP0C7N4 346 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ACO1P21399 889 aaKnown RBP10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ABCD1P33897 745 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ARRB1P49407 418 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-203ENST00000467533 TUBP50607 506 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 MFAP3P55082 362 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 RBP5P82980 135 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ARID5AQ03989 594 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 GNL2Q13823 731 aaKnown RBP10.82□□□□□ -0.68
HDAC3-203ENST00000467533 E2F5Q15329 346 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 C4orf17Q53FE4 359 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 SCARA3Q6AZY7 606 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 SERPINA13PQ6UXR4 307 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 CCDC81Q6ZN84 652 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ANKS1BQ7Z6G8 1248 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 BRSK2Q8IWQ3 736 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 EXD3Q8N9H8 876 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 MMS19Q96T76 1030 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 FAM213AQ9BRX8 229 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 CIPCQ9C0C6 399 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 ZNF518BQ9C0D4 1074 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 GDF3Q9NR23 364 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 TMEM30AQ9NV96 361 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 SLC27A6Q9Y2P4 619 aa10.82□□□□□ -0.68
HDAC3-203ENST00000467533 FAM47DPA6NHR8 397 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 TLR5O60602 858 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 USP12O75317 370 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 DNTTP04053 509 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 WARSP23381 471 aaKnown RBP10.81□□□□□ -0.68
HDAC3-203ENST00000467533 ACP1P24666 158 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 GRIN1Q05586 938 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 ST3GAL1Q11201 340 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 TTC31Q49AM3 519 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-203ENST00000467533 ARSHQ5FYA8 562 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 KIAA0895LQ68EN5 471 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 GPBP1Q86WP2 473 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 CCDC83Q8IWF9 413 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 NOC3LQ8WTT2 800 aaKnown RBP10.81□□□□□ -0.68
HDAC3-203ENST00000467533 GTF3C6Q969F1 213 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 DEPDC7Q96QD5 511 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 ORAI3Q9BRQ5 295 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 ARHGAP9Q9BRR9 750 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 IKZF4Q9H2S9 585 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 SNX25Q9H3E2 840 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 POLR1BQ9H9Y6 1135 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 AASDHPPTQ9NRN7 309 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 WDR70Q9NW82 654 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 RBAKQ9NYW8 714 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-203ENST00000467533 SIX4Q9UIU6 781 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 STYXL1Q9Y6J8 313 aa10.81□□□□□ -0.68
HDAC3-203ENST00000467533 CLDN5O00501 218 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 SUV39H1O43463 412 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 GREM1O60565 184 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 TBCAO75347 108 aaKnown RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 WNT1P04628 370 aa10.8□□□□□ -0.68
HDAC3-203ENST00000467533 KRT18P05783 430 aaKnown RBP10.8□□□□□ -0.68
HDAC3-203ENST00000467533 IGHV4-34P06331 123 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms