RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 NRSN1Q8IZ57 195 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 MAELQ96JY0 434 aaKnown RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 ZNF668Q96K58 619 aaPredicted RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 HAPLN3Q96S86 360 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 TIMP4Q99727 224 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 PTDSS2Q9BVG9 487 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 SLC25A32Q9H2D1 315 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 KLK15Q9H2R5 256 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 SEPSECSQ9HD40 501 aaKnown RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 ALG13Q9NP73 1137 aaKnown RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 TMOD4Q9NZQ9 345 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 HPSEQ9Y251 543 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 LINC00473A8K010 186 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 H0Y3Z8 333 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 SLC16A3O15427 465 aaKnown RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 DNPH1O43598 174 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 CCNT2O60583 730 aaKnown RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 BAIAP3O94812 1187 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ONECUT2O95948 504 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 PRKCBP05771 671 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 RHOP08100 348 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ANXA6P08133 673 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ARP10275 920 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 NR2F6P10588 404 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 NDUFB7P17568 137 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 KRT9P35527 623 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 DGKEP52429 567 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ZNF134P52741 427 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 BCAT1P54687 386 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 LILRA4P59901 499 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 KRT17Q04695 432 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 TRPC3Q13507 836 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 CUL4BQ13620 913 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 E2F2Q14209 437 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 L1TD1Q5T7N2 865 aaKnown RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 ARHGAP40Q5TG30 622 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 VPS53Q5VIR6 699 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 RAB11FIP2Q7L804 512 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ZNF551Q7Z340 670 aaPredicted RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 TBC1D1Q86TI0 1168 aaPredicted RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 RASGRP3Q8IV61 690 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 OR6Y1Q8NGX8 325 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 BPIFB1Q8TDL5 484 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 AFG1LQ8WV93 481 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 HTRA1Q92743 480 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 HDAC2Q92769 488 aaKnown RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 OSBPL5Q9H0X9 879 aaPredicted RBP4.74□□□□□ -1.65
SMC4-208ENST00000467468 SMC4Q9NTJ3 1288 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 ASB6Q9NWX5 421 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 SH2B3Q9UQQ2 575 aa4.74□□□□□ -1.65
SMC4-208ENST00000467468 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 B4E171 279 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 DHHO43323 396 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 RASAL1O95294 804 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 VIPP01282 170 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 EBLN1P0CF75 366 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 JUPP14923 745 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 KCNA3P22001 575 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 TSPAN7P41732 249 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 PTH2RP49190 550 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 AARSP49588 968 aaKnown RBP eCLIP4.73□□□□□ -1.653e-49■■■■■ 252.4
SMC4-208ENST00000467468 CCT8P50990 548 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 MRPS21P82921 87 aaKnown RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 UBE3AQ05086 875 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 MYO1EQ12965 1108 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 GPS1Q13098 491 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 EIF2B5Q13144 721 aaKnown RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 ZNF362Q5T0B9 420 aaPredicted RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 ABLIM2Q6H8Q1 611 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 NFRKBQ6P4R8 1299 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 ZNF804AQ7Z570 1209 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 DTX2Q86UW9 622 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 HEATR4Q86WZ0 1026 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 FAM98AQ8NCA5 519 aaKnown RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 RFKQ969G6 155 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 SARAFQ96BY9 339 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 ZDHHC12Q96GR4 267 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 TRAPPC9Q96Q05 1148 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 TRIM5Q9C035 493 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 PRDM13Q9H4Q3 707 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 TAF1DQ9H5J8 278 aaPredicted RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 JMJD4Q9H9V9 463 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 G6PC2Q9NQR9 355 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 ARHGEF3Q9NR81 526 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 NRBP1Q9UHY1 535 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 LAS1LQ9Y4W2 734 aaKnown RBP4.73□□□□□ -1.65
SMC4-208ENST00000467468 WNT6Q9Y6F9 365 aa4.73□□□□□ -1.65
SMC4-208ENST00000467468 CCDC196A0A1B0GTZ2 297 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 FAM90A18PA6NE21 464 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 FAM90A16PA6NEW6 464 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 FAM90A5PA8MXJ8 464 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 hCG_1984214I3L0E3 225 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 MASP2O00187 686 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 PPM1DO15297 605 aa4.72□□□□□ -1.65
SMC4-208ENST00000467468 CD3EAPO15446 510 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms