RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PLAAQ9Y263 795 aa5.99□□□□□ -1.45
PTCD3-207ENST00000467273 GPR55Q9Y2T6 319 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-207ENST00000467273 DOCK6Q96HP0 2047 aa5.99□□□□□ -1.45
PTCD3-207ENST00000467273 TENM4Q6N022 2769 aa5.99□□□□□ -1.45
PTCD3-207ENST00000467273 PDCD11Q14690 1871 aaKnown RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 BLACEA4D250 179 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 C4orf47A7E2U8 309 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 ARNTLO00327 626 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 ZNF263O14978 683 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 ATG13O75143 517 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MAFO75444 373 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 TADA2AO75478 443 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RFPL3O75679 317 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RHOBTB1O94844 696 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 PLEKHA8P1O95397 391 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RHOP08100 348 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MYBP10242 640 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 PNLIPP16233 465 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 PTPN2P17706 415 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 HOXA11P31270 313 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MLH1P40692 756 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 CTSKP43235 329 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 KIR2DL1P43626 348 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 KIR2DL2P43627 348 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 NCKAP1LP55160 1127 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SUMO1P63165 101 aaKnown RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 CYP4F3Q08477 520 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 DRP2Q13474 957 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 ELF2Q15723 593 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 PSMD5Q16401 504 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 DPY19L1Q2PZI1 675 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RTP2Q5QGT7 225 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 UBXN11Q5T124 520 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RNF111Q6ZNA4 994 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 TRMT1LQ7Z2T5 733 aaKnown RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 KBTBD6Q86V97 674 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RALGPS2Q86X27 583 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MFSD6LQ8IWD5 586 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 LEMD2Q8NC56 503 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 LNX1Q8TBB1 728 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 CSGALNACT1Q8TDX6 532 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SMARCD2Q92925 531 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MCRS1Q96EZ8 462 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 ZNF668Q96K58 619 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 GAD1Q99259 594 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 RIT2Q99578 217 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 MCMBPQ9BTE3 642 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 FOXP3Q9BZS1 431 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 GPR88Q9GZN0 384 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SLC32A1Q9H598 525 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 TMEM9BQ9NQ34 198 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SUCLA2Q9P2R7 463 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SF3B6Q9Y3B4 125 aaKnown RBP5.98□□□□□ -1.45
PTCD3-207ENST00000467273 IPPQ9Y573 584 aa5.98□□□□□ -1.45
PTCD3-207ENST00000467273 SSU72P8A0A1W2PR75 194 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 LNP1A1A4G5 178 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ARHGEF37A1IGU5 675 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 BCLAF3A2AJT9 711 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 MYBPHLA2RUH7 354 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 E7EWF7 191 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CHADO15335 359 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ASAP2O43150 1006 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 BUB1BO60566 1050 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ERLIN2O94905 339 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CAVIN2O95810 425 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 MPOP05164 745 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CYP21A2P08686 494 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CCDC192P0DO97 292 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 RPL17P18621 184 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CCNE1P24864 410 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 GDI1P31150 447 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 HOXC12P31275 282 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CIITAP33076 1130 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ECI1P42126 302 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 LIFRP42702 1097 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 SCNN1GP51170 649 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 NAPAP54920 295 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 GFRA1P56159 465 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 FAM193AP78312 1265 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 AMPD3Q01432 767 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 AMPD2Q01433 879 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 FCHO2Q0JRZ9 810 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 HNRNPDQ14103 355 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 PRSS53Q2L4Q9 553 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 PLK5Q496M5 336 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 FNDC3BQ53EP0 1204 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 TM4SF20Q53R12 229 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 FAM78AQ5JUQ0 283 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 NOTUMQ6P988 496 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CASC1Q6TDU7 716 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 CRTC3Q6UUV7 619 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 PRSS55Q6UWB4 352 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 VITQ6UXI7 678 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 TMTC3Q6ZXV5 915 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 TMEM145Q8NBT3 493 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 PSPC1Q8WXF1 523 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ING5Q8WYH8 240 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 MFSD3Q96ES6 412 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 B3GALT6Q96L58 329 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms