RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MRPS5P82675 430 aaKnown RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 SLC1A5Q15758 541 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 SYPL2Q5VXT5 272 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 KCNT2Q6UVM3 1135 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 HFE2Q6ZVN8 426 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 C3orf58Q8NDZ4 430 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 DCAKDQ8WVC6 231 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 ZIC5Q96T25 663 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 PAAF1Q9BRP4 392 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 MED10Q9BTT4 135 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 PPCSQ9HAB8 311 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 TRPV2Q9Y5S1 764 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 ZNF487B1APH4 448 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 MSH2P43246 934 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 SLC8A3P57103 927 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 GJA9P57773 515 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 YWHAGP61981 247 aaKnown RBP eCLIP11.85□□□□□ -0.51
HPS1-208ENST00000467246 IL9RQ01113 521 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 KLHL38Q2WGJ6 581 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 SLC45A4Q5BKX6 768 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 NCBP2-AS2Q69YL0 99 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 FAM47EQ6ZV65 393 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 MZB1Q8WU39 189 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 TRIB2Q92519 343 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 KLF6Q99612 283 aaPredicted RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 AGO3Q9H9G7 860 aaKnown RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 ABCF3Q9NUQ8 709 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 DTLQ9NZJ0 730 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 SENP1Q9P0U3 644 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 FETUBQ9UGM5 382 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 USP15Q9Y4E8 981 aaPredicted RBP11.85□□□□□ -0.51
HPS1-208ENST00000467246 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 MYBPHLA2RUH7 354 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 NRP1O14786 923 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CYBAP13498 195 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SCTRP47872 440 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 TRIM32Q13049 653 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 KBTBD12Q3ZCT8 623 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 KCNK16Q96T55 309 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CYTH2Q99418 400 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SENP6Q9GZR1 1112 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 DNAI2Q9GZS0 605 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 KLC2Q9H0B6 622 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 LRRC4Q9HBW1 653 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 KRT82Q9NSB4 513 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 TMEM30AQ9NV96 361 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 FZD10Q9ULW2 581 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 HTTP42858 3142 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 ARL5CA6NH57 179 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 THP07101 528 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SLC10A3P09131 477 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 SCNN1GP51170 649 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 TKTL1P51854 596 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 NME3Q13232 169 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 AGMOQ6ZNB7 445 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 TRPM8Q7Z2W7 1104 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 PRPF39Q86UA1 669 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CDKL3Q8IVW4 592 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 RNF169Q8NCN4 708 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CFAP36Q96G28 342 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 C12orf65Q9H3J6 166 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 SMG5Q9UPR3 1016 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 F5H423 210 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 M0QYT0 321 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 DAB1O75553 588 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SLC18A1P54219 525 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 CACNA2D1P54289 1103 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SPARCL1Q14515 664 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SPATA21Q7Z572 469 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 KCTD13Q8WZ19 329 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 NT5C3BQ969T7 300 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 NPY6RQ99463 290 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 LGMNQ99538 433 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 TRIM56Q9BRZ2 755 aaKnown RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
HPS1-208ENST00000467246 PLAC1Q9HBJ0 212 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SLC24A3Q9HC58 644 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
HPS1-208ENST00000467246 I3L4J1 428 aa11.83□□□□□ -0.52
HPS1-208ENST00000467246 KPNA6O60684 536 aa11.83□□□□□ -0.52
HPS1-208ENST00000467246 GCATO75600 419 aa11.83□□□□□ -0.52
HPS1-208ENST00000467246 FYNP06241 537 aa11.83□□□□□ -0.52
HPS1-208ENST00000467246 TSHRP16473 764 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms