RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 LRRC39Q96DD0 335 aa20.05■□□□□ 0.8
LIMS2-212ENST00000466410 PCMTD2Q9NV79 361 aa20.05■□□□□ 0.8
LIMS2-212ENST00000466410 I3L4J1 428 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 CXCL11O14625 94 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 HCRTO43612 131 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 CHI3L2Q15782 390 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 TRIM68Q6AZZ1 485 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 CDKL3Q8IVW4 592 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 AFG1LQ8WV93 481 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 ZMAT2Q96NC0 199 aaKnown RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 ANKRD27Q96NW4 1050 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 EBNA1BP2Q99848 306 aaKnown RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 MYO18AQ92614 2054 aaKnown RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 KRT38O76015 456 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 TOP3BO95985 862 aaKnown RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 MTHFD1LQ6UB35 978 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 KCNT2Q6UVM3 1135 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 SULF1Q8IWU6 871 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 GSDMBQ8TAX9 411 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 C7orf26Q96N11 449 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 FAM124BQ9H5Z6 455 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-212ENST00000466410 RNF19AQ9NV58 838 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 SIRPGQ9P1W8 387 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 HESX1Q9UBX0 185 aa20.04■□□□□ 0.8
LIMS2-212ENST00000466410 FAM159BA6NKW6 160 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 EIF4E1BA6NMX2 242 aaKnown RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 GCATO75600 419 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 LAMC2Q13753 1193 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 KPNB1Q14974 876 aaKnown RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 DPYSL2Q16555 572 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 ARID3BQ8IVW6 561 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 NDUFAF2Q8N183 169 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 MCUR1Q96AQ8 359 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 LBHD1Q9BQE6 289 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 DPEP3Q9H4B8 488 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 ARHGEF4Q9NR80 690 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 MTMR10Q9NXD2 777 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 MFHAS1Q9Y4C4 1052 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 PLXNA1Q9UIW2 1896 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 F5H423 210 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 CPA2P48052 419 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 OCRLQ01968 901 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 ACSBG2Q5FVE4 666 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 NT5DC4Q86YG4 428 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 NUDCD3Q8IVD9 361 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 C7orf31Q8N865 590 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 C20orf27Q9GZN8 174 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 KCNK4Q9NYG8 393 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 MARCOQ9UEW3 520 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-212ENST00000466410 TUBGCP4Q9UGJ1 667 aa20.03■□□□□ 0.8
LIMS2-212ENST00000466410 GSTA2P09210 222 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SETSIPP0DME0 302 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 KITP10721 976 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 RARBP10826 455 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 PAX7P23759 505 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 GRM5P41594 1212 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 TEX44Q53QW1 395 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 TAPT1Q6NXT6 567 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 MAMDC4Q6UXC1 1216 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 UNC5BQ8IZJ1 945 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 DCPSQ96C86 337 aaKnown RBP20.02■□□□□ 0.8
LIMS2-212ENST00000466410 MROH8Q9H579 483 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 MKS1Q9NXB0 559 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 AP4E1Q9UPM8 1137 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SPDYE5A6NIY4 337 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 A6NJR5 290 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 ASB14A6NK59 587 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SKAP2O75563 359 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-212ENST00000466410 LMNAP02545 664 aaKnown RBP20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SESN3P58005 492 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SOWAHAQ2M3V2 549 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 ATG16L1Q676U5 607 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 TREML1Q86YW5 311 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 TRIM42Q8IWZ5 723 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 OR6B3Q8NGW1 331 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 WDR60Q8WVS4 1066 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 MTBPQ96DY7 904 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 KCTD15Q96SI1 283 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-212ENST00000466410 C16orf70Q9BSU1 422 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 C11orf84Q9BUA3 381 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-212ENST00000466410 SNTG2Q9NY99 539 aa20.02■□□□□ 0.8
LIMS2-212ENST00000466410 NPTXRO95502 500 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 DESP17661 470 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 TPSB2P20231 275 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 BLMHQ13867 455 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 TPSAB1Q15661 275 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 CCDC185Q8N715 623 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 C18orf25Q96B23 403 aaPredicted RBP20.01■□□□□ 0.79
LIMS2-212ENST00000466410 CSPG4P5Q96PW8 444 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.01■□□□□ 0.79
LIMS2-212ENST00000466410 PCDHA11Q9Y5I1 949 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 ZNF487B1APH4 448 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 KRT36O76013 467 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 AMPD1P23109 780 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 PTPN9P43378 593 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 RCN1Q15293 331 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 GLRA4Q5JXX5 417 aa20.01■□□□□ 0.79
LIMS2-212ENST00000466410 FAM91A1Q658Y4 838 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms