RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 RSPH14Q9UHP6 348 aa14.07□□□□□ -0.16
UBE4B-206ENST00000466379 STAP1Q9ULZ2 295 aa14.07□□□□□ -0.16
UBE4B-206ENST00000466379 USP3Q9Y6I4 520 aa14.07□□□□□ -0.16
UBE4B-206ENST00000466379 A0A087WUV0 522 aaPredicted RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 A6NNZ2 444 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 M0QZQ0 153 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CREB3O43889 395 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CYP11A1P05108 521 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 IVLP07476 585 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 OR4Q2P0C623 313 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 NCAM1P13591 858 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 ARL4CP56559 192 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 IFRD2Q12894 506 aaPredicted RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 BBS9Q3SYG4 887 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 TUBB8Q3ZCM7 444 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CEP128Q6ZU80 1094 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 BHLHA9Q7RTU4 235 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 BNIPLQ7Z465 357 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 VSIG1Q86XK7 387 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 ZNF296Q8WUU4 475 aaPredicted RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 ARHGEF2Q92974 986 aaKnown RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 EPN3Q9H201 632 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 RAB6BQ9NRW1 208 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 POC1B-GALNT4F8VUJ3 575 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 PIAS1O75925 651 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 FBXO21O94952 628 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 SSTR1P30872 391 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 VEGFBP49765 207 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 GPX6P59796 221 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 DCLRE1AQ6PJP8 1040 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 GLB1LQ6UWU2 654 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 PKMYT1Q99640 499 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 STMN4Q9H169 189 aaPredicted RBP14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CNGB3Q9NQW8 809 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 SQORQ9Y6N5 450 aa14.06□□□□□ -0.16
UBE4B-206ENST00000466379 CLUHO75153 1309 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 EXOC1LA0A1B0GW35 172 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
UBE4B-206ENST00000466379 ZNF487B1APH4 448 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
UBE4B-206ENST00000466379 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 MFSD11O43934 449 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 ABHD2P08910 425 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 GCAP28676 217 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 GRK4P32298 578 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 ARL4AP40617 200 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 STAT4Q14765 748 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 TMED2Q15363 201 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 KCNT2Q6UVM3 1135 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 SLC24A5Q71RS6 500 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 FBXO36Q8NEA4 188 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 SUSD3Q96L08 255 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 UROC1Q96N76 676 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 TTC25Q96NG3 672 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 CNOT10Q9H9A5 744 aaKnown RBP14.05□□□□□ -0.16
UBE4B-206ENST00000466379 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 DTLQ9NZJ0 730 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
UBE4B-206ENST00000466379 PRG3Q9Y2Y8 225 aaPredicted RBP14.05□□□□□ -0.16
UBE4B-206ENST00000466379 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
UBE4B-206ENST00000466379 F5H423 210 aaPredicted RBP14.04□□□□□ -0.16
UBE4B-206ENST00000466379 FAM72CH0Y354 149 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 ARVCFO00192 962 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 NDC80O14777 642 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 AVILO75366 819 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 TCEA3O75764 348 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 LTFP02788 710 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 OR1G1P47890 313 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 APLP1P51693 650 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 KCNJ11Q14654 390 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 EFTUD2Q15029 972 aaKnown RBP eCLIP14.04□□□□□ -0.164e-8■■□□□ 13.2
UBE4B-206ENST00000466379 FAM72AQ5TYM5 149 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 FAM72DQ6L9T8 149 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 FAM72BQ86X60 149 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
UBE4B-206ENST00000466379 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 SCAMP5Q8TAC9 235 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 MGARPQ8TDB4 240 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 PYROXD1Q8WU10 500 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 CCDC77Q9BR77 488 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 CSNK1G1Q9HCP0 422 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 PAK5Q9P286 719 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 CHMP2BQ9UQN3 213 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 SNX10Q9Y5X0 201 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
UBE4B-206ENST00000466379 SLC45A4Q5BKX6 768 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 NOMO2Q5JPE7 1267 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 LRRC8DQ7L1W4 858 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 IGDCC3Q8IVU1 814 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 THEM5Q8N1Q8 247 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
UBE4B-206ENST00000466379 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms