RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	DAB1	O75553	588 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	FBXO21	O94952	628 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	HAPLN1	P10915	354 aa	Predicted RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PYGM	P11217	842 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	LCP1	P13796	627 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	TFE3	P19532	575 aa	Predicted RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	GPD1	P21695	349 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PCK1	P35558	622 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PPM1A	P35813	382 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PGF	P49763	221 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	ARSE	P51690	589 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	ROR1	Q01973	937 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SIX1	Q15475	284 aa	Predicted RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PSMD5	Q16401	504 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	EFHC1	Q5JVL4	640 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SH3PXD2A	Q5TCZ1	1133 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	CC2D1A	Q6P1N0	951 aa	Predicted RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	DCUN1D2	Q6PH85	259 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	POLN	Q7Z5Q5	900 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	CEP57	Q86XR8	500 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	RNF135	Q8IUD6	432 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SPATA2L	Q8IUW3	424 aa	Predicted RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	KATNAL2	Q8IYT4	538 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	ATAD1	Q8NBU5	361 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM71B	Q8TC56	605 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SPPL2B	Q8TCT7	592 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	IRGQ	Q8WZA9	623 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	NDRG1	Q92597	394 aa	Known RBP	9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PEBP4	Q96S96	227 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	NPY6R	Q99463	290 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	HERPUD2	Q9BSE4	406 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SYNC	Q9H7C4	482 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SMARCAL1	Q9NZC9	954 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	HSFX1	Q9UBD0	423 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	PCDHB5	Q9Y5E4	795 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	SLC4A7	Q9Y6M7	1214 aa		9.22	□□□□□ -0.93
UBA3-208	ENST00000465627	LINC01553	A4QN01	128 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SOBP	A7XYQ1	873 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ZBBX	A8MT70	800 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	C5orf67	F2Z3F1	127 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SPOP	O43791	374 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	HSF2BP	O75031	334 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	GRAP2	O75791	330 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	FGF18	O76093	207 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ZBED1	O96006	694 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	IGLV3-25	P01717	112 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	PDGFRA	P16234	1089 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ATP2A2	P16615	1042 aa	Known RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ATF6	P18850	670 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	PSMA2	P25787	234 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	PTPN7	P35236	360 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	MATK	P42679	507 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	GLUD2	P49448	558 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	GPR15	P49685	360 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	HDAC4	P56524	1084 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SLC8A3	P57103	927 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	YWHAZ	P63104	245 aa	Known RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	PITX1	P78337	314 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	KLF1	Q13351	362 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	RAB33A	Q14088	237 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	C15orf59	Q2T9L4	293 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ATP13A4	Q4VNC1	1196 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ARTN	Q5T4W7	220 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	AADACL2	Q6P093	401 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SCD5	Q86SK9	330 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	RHOT1	Q8IXI2	618 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	FIBCD1	Q8N539	461 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	CEP112	Q8N8E3	955 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	NOA1	Q8NC60	698 aa	Known RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	CMAS	Q8NFW8	434 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SCAMP5	Q8TAC9	235 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	RIN2	Q8WYP3	895 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	PGAP3	Q96FM1	320 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	TMEM169	Q96HH4	297 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	SPATA17	Q96L03	361 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	CEP295NL	Q96MC4	621 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	CFAP57	Q96MR6	1250 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	TTLL2	Q9BWV7	592 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	LRRC4	Q9HBW1	653 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	ABI2	Q9NYB9	513 aa	Predicted RBP	9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	DLL3	Q9NYJ7	618 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	FNIP2	Q9P278	1114 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	NR2E1	Q9Y466	385 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	CDY1	Q9Y6F8	540 aa		9.21	□□□□□ -0.94
UBA3-208	ENST00000465627	EFCAB8	A8MWE9	144 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	FSCN2	O14926	492 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	SART1	O43290	800 aa	Known RBP	9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	SEC24A	O95486	1093 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	TRUB2	O95900	331 aa	Known RBP	9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	USP17L7	P0C7H9	530 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	ZDHHC11B	P0C7U3	371 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	CTSA	P10619	480 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	RPL17	P18621	184 aa	Known RBP	9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	MIP	P30301	263 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	OR1D2	P34982	312 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	NOS2	P35228	1153 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	BMPR1A	P36894	532 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	SLC5A3	P53794	718 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	RWDD2B	P57060	319 aa		9.2	□□□□□ -0.94
UBA3-208	ENST00000465627	USP46	P62068	366 aa		9.2	□□□□□ -0.94

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