RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 RALGPS2Q86X27 583 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 MCOLN2Q8IZK6 566 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 RSAD2Q8WXG1 361 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 EDEM1Q92611 657 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 NECAB3Q96P71 396 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 SLC22A12Q96S37 553 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 FAM83CQ9BQN1 747 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 COL25A1Q9BXS0 654 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 ISCUQ9H1K1 167 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 GKN1Q9NS71 199 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 SMPD4Q9NXE4 827 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 CCL26Q9Y258 94 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
ERGIC3-212ENST00000465298 BDP1A6H8Y1 2624 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SIGLEC16A6NMB1 481 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 IRAK2O43187 625 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TRUB2O95900 331 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TBX18O95935 607 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 FTLP02792 175 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SKILP12757 684 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ABCB4P21439 1286 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 CCR1P32246 355 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ADKP55263 362 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TBX4P57082 545 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 GAD2Q05329 585 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 GRM2Q14416 872 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SLC18A3Q16572 532 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SLC25A52Q3SY17 297 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 DNAJC24Q6P3W2 148 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TRIM67Q6ZTA4 783 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 DEFB106AQ8N104 65 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 SLC30A5Q8TAD4 765 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 DQX1Q8TE96 717 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 RNF34Q969K3 372 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 PGAP3Q96FM1 320 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 PCDHB18PQ96TA0 734 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 MFSD1Q9H3U5 465 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 CD320Q9NPF0 282 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-212ENST00000465298 DOCK6Q96HP0 2047 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 ZNF638Q14966 1978 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 GABBR2O75899 941 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 STC2O76061 302 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 EIF2DP41214 584 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 MAGEA9P43362 315 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 PTPN9P43378 593 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 MRE11P49959 708 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 RNASE9P60153 205 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 PPP2R5DQ14738 602 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 SPA17Q15506 151 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 MLF2Q15773 248 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 ARL13BQ3SXY8 428 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 BRMS1LQ5PSV4 323 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 ZNF852Q6ZMS4 543 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CCDC117Q8IWD4 279 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 ADGRG2Q8IZP9 1017 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CPXM2Q8N436 756 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CLEC4CQ8WTT0 213 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CTNNBL1Q8WYA6 563 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 CALR3Q96L12 384 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 XPO6Q96QU8 1125 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 RPP25Q9BUL9 199 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 DDX23Q9BUQ8 820 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 OSBPL6Q9BZF3 934 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 PLA2G2FQ9BZM2 168 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 SMG9Q9H0W8 520 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 DDIT4Q9NX09 232 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 TMEM59LQ9UK28 342 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 NAALADL1Q9UQQ1 740 aa13.73□□□□□ -0.21
ERGIC3-212ENST00000465298 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 IRF1P10914 325 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 CORO1AP31146 461 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 AIF1P55008 147 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 ACAP1Q15027 740 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 EML3Q32P44 896 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 CCDC122Q5T0U0 273 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 ADGRF1Q5T601 910 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 POTEHQ6S545 545 aa13.72□□□□□ -0.21
ERGIC3-212ENST00000465298 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms