RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 UNC93AQ86WB7 457 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 SLC9A9Q8IVB4 645 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 SLC41A1Q8IVJ1 513 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 BHMTQ93088 406 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 CAPN10Q9HC96 672 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 CD248Q9HCU0 757 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 SCML2Q9UQR0 700 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 RAD54BQ9Y620 910 aa24.44■■□□□ 1.5
SSNA1-203ENST00000463511 TMEM8BA6NDV4 472 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 PPP1R3GB7ZBB8 358 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 MDM4O15151 490 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 ZBTB24O43167 697 aaPredicted RBP24.43■■□□□ 1.5
SSNA1-203ENST00000463511 ASS1P00966 412 aaKnown RBP24.43■■□□□ 1.5
SSNA1-203ENST00000463511 CLEC20AQ6ZU45 233 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 SV2AQ7L0J3 742 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 HDDC3Q8N4P3 179 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 OR2I1PQ8NGU4 316 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 TAF4BQ92750 862 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 HSPA12BQ96MM6 686 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 TWNKQ96RR1 684 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 SLC6A17Q9H1V8 727 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 CD93Q9NPY3 652 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 CACNA2D2Q9NY47 1150 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 MARK1Q9P0L2 795 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 TMEM63CQ9P1W3 806 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 WDR35Q9P2L0 1181 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 NUDT5Q9UKK9 219 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 TRAF3IP3Q9Y228 551 aa24.43■■□□□ 1.5
SSNA1-203ENST00000463511 HHLA1C9JL84 531 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 ZNF217O75362 1048 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 HLA-DRAP01903 254 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 NR3C1P04150 777 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 ZCWPW2Q504Y3 356 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 CCDC183Q5T5S1 534 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 CEP135Q66GS9 1140 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 RABEPKQ7Z6M1 372 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 MINDY1Q8N5J2 469 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 GABRG3Q99928 467 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 NMUR1Q9HB89 426 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 PKD1L2Q7Z442 2459 aa24.42■■□□□ 1.5
SSNA1-203ENST00000463511 ZFYVE26Q68DK2 2539 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 CKAP5Q14008 2032 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 A0A1W2PQH9 124 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 UPK3BL1B0FP48 263 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 UPK3BL2E5RIL1 263 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 OPHN1O60890 802 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 ACO1P21399 889 aaKnown RBP24.41■■□□□ 1.5
SSNA1-203ENST00000463511 DGKGP49619 791 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 C1orf220Q5T0J3 134 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 TMC2Q8TDI7 906 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 TMEM174Q8WUU8 243 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 ZCCHC14Q8WYQ9 949 aaKnown RBP24.41■■□□□ 1.5
SSNA1-203ENST00000463511 HNRNPABQ99729 332 aaKnown RBP24.41■■□□□ 1.5
SSNA1-203ENST00000463511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.41■■□□□ 1.5
SSNA1-203ENST00000463511 PLK2Q9NYY3 685 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 KLK13Q9UKR3 277 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 NEUROG3Q9Y4Z2 214 aa24.41■■□□□ 1.5
SSNA1-203ENST00000463511 CALUO43852 315 aaPredicted RBP24.4■■□□□ 1.5
SSNA1-203ENST00000463511 RARGP13631 454 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 TRIM21P19474 475 aaKnown RBP24.4■■□□□ 1.5
SSNA1-203ENST00000463511 INCA1Q0VD86 236 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 KLHL40Q2TBA0 621 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 C10orf120Q5SQS8 335 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 CYFIP2Q96F07 1278 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 DHTKD1Q96HY7 919 aaPredicted RBP24.4■■□□□ 1.5
SSNA1-203ENST00000463511 MRGPRX1Q96LB2 322 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 DNMT3LQ9UJW3 386 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 DMXL2Q8TDJ6 3036 aa24.4■■□□□ 1.5
SSNA1-203ENST00000463511 ARHGAP33O14559 1287 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 PPP1R2P41236 205 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 PMS1P54277 932 aaKnown RBP24.39■■□□□ 1.49
SSNA1-203ENST00000463511 FAM193AP78312 1265 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 STIM1Q13586 685 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 NFIL3Q16649 462 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 KIAA1324Q6UXG2 1013 aaKnown RBP24.39■■□□□ 1.49
SSNA1-203ENST00000463511 Q6ZNB5 142 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 RGL4Q8IZJ4 473 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 NAGPAQ9UK23 515 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 FRMD4BQ9Y2L6 1034 aa24.39■■□□□ 1.49
SSNA1-203ENST00000463511 WASH3PC4AMC7 463 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 IKBKBO14920 756 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 NDUFS2O75306 463 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 CISD3P0C7P0 127 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 PLA2G4AP47712 749 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 NFKBIBQ15653 356 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 ANKRD40Q6AI12 368 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 CAVIN1Q6NZI2 390 aaKnown RBP24.38■■□□□ 1.49
SSNA1-203ENST00000463511 KLHDC10Q6PID8 442 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 P2RY11Q96G91 374 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 NT5C1AQ9BXI3 368 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 IMPG2Q9BZV3 1241 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 APOBEC3GQ9HC16 384 aaKnown RBP24.38■■□□□ 1.49
SSNA1-203ENST00000463511 PNPLA8Q9NP80 782 aa24.38■■□□□ 1.49
SSNA1-203ENST00000463511 SRRM3A6NNA2 597 aaPredicted RBP24.37■■□□□ 1.49
SSNA1-203ENST00000463511 PSMA7O14818 248 aa24.37■■□□□ 1.49
SSNA1-203ENST00000463511 STC2O76061 302 aa24.37■■□□□ 1.49
SSNA1-203ENST00000463511 SYPP08247 313 aa24.37■■□□□ 1.49
SSNA1-203ENST00000463511 CD59P13987 128 aa24.37■■□□□ 1.49
SSNA1-203ENST00000463511 CD58P19256 250 aa24.37■■□□□ 1.49
SSNA1-203ENST00000463511 EDRF1Q3B7T1 1238 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms