RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 KLF8O95600 359 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 GNA15P30679 374 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 TIE1P35590 1138 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 DGKGP49619 791 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 RGS7P49802 495 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 DAOAP59103 153 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 ARHGAP8P85298 464 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 LMNB2Q03252 620 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 BYSLQ13895 437 aaKnown RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 ELF2Q15723 593 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 LPAL2Q16609 132 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 DPCR1Q3MIW9 517 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 FMNL3Q8IVF7 1028 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 TXNDC5Q8NBS9 432 aaKnown RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 KREMEN1Q96MU8 473 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 ST7Q9NRC1 585 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 C2orf42Q9NWW7 574 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 GREM1O60565 184 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 LATS1O95835 1130 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 MBD3O95983 291 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 LTFP02788 710 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 ID4P47928 161 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 PXNP49023 591 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 BPIFB4P59827 614 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 PTK2Q05397 1052 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 CRY1Q16526 586 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 ARHGAP44Q17R89 818 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 VWA3BQ502W6 1294 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 NUGGCQ68CJ6 796 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 PMF1Q6P1K2 205 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 SASS6Q6UVJ0 657 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 DENND1CQ8IV53 801 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 DCLK2Q8N568 766 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 ALLCQ8N6M5 410 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 ANKRD20A12PQ8NF67 263 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 STK32AQ8WU08 396 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 UCMAQ8WVF2 138 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 EDEM1Q92611 657 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 WBP2Q969T9 261 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 SPACA7Q96KW9 195 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 MED15Q96RN5 788 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 DDX50Q9BQ39 737 aaKnown RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 AGO1Q9UL18 857 aaKnown RBP13.69□□□□□ -0.22
HDAC1-203ENST00000463172 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
HDAC1-203ENST00000463172 SDK1Q7Z5N4 2213 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 TYW5A2RUC4 315 aaKnown RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 YJEFN3A6XGL0 299 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 E7ENQ6 273 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 CAPN9O14815 690 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 NPC1O15118 1278 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 SLC9A1P19634 815 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 PON1P27169 355 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 KIR2DL1P43626 348 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 SLC11A2P49281 568 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 SRSF5Q13243 272 aaKnown RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 MPPE1Q53F39 396 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 IRF2BP1Q8IU81 584 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 IL17RCQ8NAC3 791 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 DDI1Q8WTU0 396 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 FAM149B1Q96BN6 582 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 SERPINB11Q96P15 392 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 SLC2A11Q9BYW1 496 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-203ENST00000463172 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
HDAC1-203ENST00000463172 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 PENKP01210 267 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-203ENST00000463172 KLKB1P03952 638 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 NTSR1P30989 418 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 GBP1P32455 592 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 KRT9P35527 623 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 GPD2P43304 727 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 ARID5AQ03989 594 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 MSANTD2Q6P1R3 559 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 BHLHA9Q7RTU4 235 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 RASSF3Q86WH2 238 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 CCDC117Q8IWD4 279 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms